 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | Acav_1501 | 1670486..1671712 [-], 1227 | 326316318 | RND family efflux transporter MFP subunit | |
2 | Acav_1502 | 1671875..1672765 [+], 891 | 326316319 | squalene synthase HpnC | |
3 | Acav_1503 | 1672809..1673465 [-], 657 | 326316320 | hypothetical protein | |
4 | Acav_1504 | 1673795..1674277 [-], 483 | 326316321 | hypothetical protein | TssD |
5 | Acav_1505 | 1674854..1676827 [+], 1974 | 326316322 | serine/threonine protein kinase | |
6 | Acav_1506 | 1676933..1677439 [+], 507 | 326316323 | hypothetical protein | |
7 | Acav_1507 | 1677461..1679818 [+], 2358 | 326316324 | FHA domain-containing protein | Fha |
8 | Acav_1508 | 1679815..1680603 [+], 789 | 326316325 | protein serine/threonine phosphatase | |
9 | Acav_1509 | 1680647..1681228 [+], 582 | 326316326 | type VI secretion lipoprotein | TssJ |
10 | Acav_1510 | 1681276..1682610 [+], 1335 | 326316327 | type VI secretion protein | TssK |
11 | Acav_1511 | 1682625..1683977 [+], 1353 | 326316328 | DotU family type IV / VI secretion system protein | TssL |
12 | Acav_1512 | 1683981..1687613 [+], 3633 | 326316329 | type VI secretion protein IcmF | TssM |
13 | Acav_1513 | 1687613..1688308 [+], 696 | 326316330 | type VI secretion system-associated protein | |
14 | Acav_1514 | 1688354..1689403 [+], 1050 | 326316331 | type VI secretion-associated protein, ImpA family | TssA |
15 | Acav_1515 | 1689564..1690112 [+], 549 | 326316332 | type VI secretion protein | TssB |
16 | Acav_1516 | 1690126..1691625 [+], 1500 | 326316333 | type VI secretion protein EvpB | TssC |
17 | Acav_1517 | 1691750..1692538 [+], 789 | 326316334 | virulence protein SciE type | TagJ |
18 | Acav_1518 | 1692555..1693076 [+], 522 | 326316335 | type VI secretion system lysozyme-like protein | TssE |
19 | Acav_1519 | 1693150..1695024 [+], 1875 | 326316336 | type VI secretion protein | TssF |
20 | Acav_1520 | 1695021..1696187 [+], 1167 | 326316337 | type VI secretion protein | TssG |
21 | Acav_1521 | 1696258..1698996 [+], 2739 | 326316338 | type VI secretion ATPase, ClpV1 family | TssH |
22 | Acav_1523 | 1700138..1700641 [+], 504 | 326316339 | hypothetical protein | |
23 | Acav_1524 | 1700652..1702904 [-], 2253 | 326316340 | xanthine dehydrogenase | |
24 | Acav_1525 | 1702910..1703860 [-], 951 | 326316341 | xanthine dehydrogenase | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein