 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | plu2276 | 2674801..2675373 [+], 573 | 37526189 | hypothetical protein | |
2 | plu2277 | 2675668..2676039 [+], 372 | 37526190 | hypothetical protein | |
3 | plu2278 (ccdA) | 2676127..2676366 [+], 240 | 37526191 | CcdA protein | |
4 | plu2279 (ccdB) | 2676368..2676673 [+], 306 | 37526192 | cytotoxic protein CcdB | |
5 | plu2280 | 2676944..2677198 [-], 255 | 37526193 | hypothetical protein | |
6 | plu2281 | 2677254..2677712 [-], 459 | 37526194 | hypothetical protein | |
7 | plu2282 (ISPlu1C) | 2677694..2678662 [-], 969 | 37526195 | IS30 family transposase | |
8 | plu2283 | 2678805..2679005 [-], 201 | 37526196 | hypothetical protein | |
9 | plu2284 (bvgS) | 2679150..2682761 [-], 3612 | 37526197 | virulence sensor protein BvgS precursor | |
10 | plu2285 (bvgR) | 2682765..2683391 [-], 627 | 37526198 | two-component response regulator BvgR protein | |
11 | plu2286 | 2683422..2684681 [-], 1260 | 37526199 | hypothetical protein | |
12 | plu2287 | 2684731..2687313 [-], 2583 | 37526200 | hypothetical protein | TssH |
13 | plu2288 | 2687306..2690815 [-], 3510 | 37526201 | hypothetical protein | TssM |
14 | plu2289 | 2690831..2691451 [-], 621 | 37526202 | hypothetical protein | TssL |
15 | plu2290 | 2691451..2692848 [-], 1398 | 37526203 | hypothetical protein | TssK |
16 | plu2291 | 2692852..2693529 [-], 678 | 37526204 | hypothetical protein | TssJ |
17 | plu2292 | 2693522..2694625 [-], 1104 | 37526205 | hypothetical protein | TssA |
18 | plu2293 | 2694639..2694941 [-], 303 | 37526206 | hypothetical protein | PAAR |
19 | plu2294 | 2694938..2695534 [-], 597 | 37526207 | hypothetical protein | |
20 | plu2295 | 2695569..2697575 [-], 2007 | 37526208 | hypothetical protein | TssI |
21 | plu2296 | 2697600..2698610 [-], 1011 | 37526209 | hypothetical protein | TssG |
22 | plu2297 | 2698601..2700412 [-], 1812 | 37526210 | hypothetical protein | TssF |
23 | plu2298 | 2700417..2700860 [-], 444 | 37526211 | hypothetical protein | TssE |
24 | plu2299 | 2700912..2701406 [-], 495 | 37526212 | hypothetical protein | TssD |
25 | plu2300 | 2701463..2702944 [-], 1482 | 37526213 | hypothetical protein | TssC |
26 | plu2301 | 2702952..2703503 [-], 552 | 37526214 | hypothetical protein | TssB |
27 | plu2302 | 2704228..2704482 [+], 255 | 37526215 | hypothetical protein | |
28 | plu2303 | 2704727..2705602 [-], 876 | 37526216 | hypothetical protein | |
29 | plu2305 | 2706247..2706519 [+], 273 | 37526217 | hypothetical protein | |
30 | plu2306 | 2706507..2706797 [+], 291 | 37526218 | hypothetical protein | |
31 | plu2308 | 2707235..2707513 [-], 279 | 37526219 | hypothetical protein | |
32 | plu2309 | 2707510..2707812 [-], 303 | 37526220 | hypothetical protein | |
33 | plu2313 | 2709005..2710858 [+], 1854 | 37526221 | hypothetical protein | |
34 | plu2314 (ISPlu3T) | 2710876..2711901 [-], 1026 | 37526222 | IS630 family transposase | |
|
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein