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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | BYI23_C003550 | 409192..410451 [+], 1260 | 377807747 | amidase | |
2 | BYI23_C003560 (mlrC) | 410448..411929 [+], 1482 | 377807748 | microcystin LR degradation protein MlrC-like protein | |
3 | BYI23_C003570 | 412001..413023 [+], 1023 | 377807749 | hypothetical protein | |
4 | BYI23_C003580 | 413108..413611 [+], 504 | 377807750 | hypothetical protein | |
5 | BYI23_C003590 (impA) | 413695..414717 [+], 1023 | 377807751 | protein ImpA | TssA |
6 | BYI23_C003600 | 414755..415279 [+], 525 | 377807752 | type VI secretion protein | TssB |
7 | BYI23_C003610 (evpB) | 415290..416807 [+], 1518 | 377807753 | type VI secretion protein, EvpB | TssC |
8 | BYI23_C003620 | 416858..417349 [+], 492 | 377807754 | hypothetical protein | TssD |
9 | BYI23_C003630 | 417357..417866 [+], 510 | 377807755 | type VI secretion system lysozyme like protein | TssE |
10 | BYI23_C003640 | 417863..419725 [+], 1863 | 377807756 | type VI secretion protein | TssF |
11 | BYI23_C003650 | 419710..420726 [+], 1017 | 377807757 | type VI secretion protein | TssG |
12 | BYI23_C003660 | 420731..423340 [+], 2610 | 377807758 | chaperone | TssH |
13 | BYI23_C003670 | 423327..425300 [+], 1974 | 377807759 | ImpA family type VI secretion-associated protein | TssI |
14 | BYI23_C003680 | 425310..426689 [+], 1380 | 377807760 | regulatory protein | Fha |
15 | BYI23_C003690 | 426698..428032 [+], 1335 | 377807761 | type VI secretion protein | TssK |
16 | BYI23_C003700 (dotU) | 428061..429395 [+], 1335 | 377807762 | DotU family type IV/VI secretion system protein | TssL |
17 | BYI23_C003710 | 429392..432901 [+], 3510 | 377807763 | hypothetical protein | TssM |
18 | BYI23_C003720 | 432898..433425 [+], 528 | 377807764 | hypothetical protein | TagF |
19 | BYI23_C003730 | 433428..434777 [-], 1350 | 377807765 | serine/threonine protein kinase | |
20 | BYI23_C003740 | 434781..435674 [-], 894 | 377807766 | sensor protein | |
21 | BYI23_C003750 | 435704..436540 [-], 837 | 377807767 | hypothetical protein | |
22 | BYI23_C003760 | 436632..437573 [-], 942 | 377807768 | putative transmembrane anti-sigma factor | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein