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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | BYI23_C010190 | 1192499..1193329 [-], 831 | 377808411 | phospholipase D/Transphosphatidylase | |
2 | BYI23_C010200 | 1193848..1195068 [-], 1221 | 377808412 | Sel1 domain-containing protein repeat-containing protein | |
3 | BYI23_C010210 | 1195146..1197191 [-], 2046 | 377808413 | phospholipase D/Transphosphatidylase | |
4 | BYI23_C010220 | 1197184..1199844 [-], 2661 | 377808414 | hypothetical protein | TssI |
5 | BYI23_C010230 (evpB) | 1200236..1201789 [-], 1554 | 377808415 | type VI secretion protein, EvpB | TssC |
6 | BYI23_C010240 | 1201833..1202345 [-], 513 | 377808416 | hypothetical protein | TssB |
7 | BYI23_C010250 | 1202827..1204179 [+], 1353 | 377808417 | hypothetical protein | TssK |
8 | BYI23_C010260 | 1204176..1204904 [+], 729 | 377808418 | hypothetical protein | TssL |
9 | BYI23_C010270 (ompA/motB) | 1204844..1206592 [+], 1749 | 377808419 | OmpA/MotB family outer membrane protein | TagL |
10 | BYI23_C010280 | 1206688..1207173 [+], 486 | 377808420 | hypothetical protein | TssD |
11 | BYI23_C010290 | 1207288..1209954 [+], 2667 | 377808421 | ATPase with chaperone activity ATP-binding subunit | TssH |
12 | BYI23_C010300 | 1209929..1210387 [+], 459 | 377808422 | hypothetical protein | TssE |
13 | BYI23_C010310 | 1210412..1211752 [-], 1341 | 377808423 | major facilitator superfamily transporter | |
14 | BYI23_C010320 | 1211802..1213400 [-], 1599 | 377808424 | AMP-dependent synthetase and ligase | |
15 | BYI23_C010330 | 1213397..1214839 [-], 1443 | 377808425 | succinate-semialdehyde dehydrogenase (NAD(P)+) | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein