 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | BDGL_000620 | 650283..651305 [+], 1023 | 375134238 | ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein | |
2 | BDGL_000621 | 651357..652238 [-], 882 | 375134239 | ABC transporter | |
3 | BDGL_000622 (ssuC) | 652238..652495 [-], 258 | 375134240 | ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit | |
4 | BDGL_000623 | 652473..653144 [-], 672 | 375134241 | ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit | |
5 | BDGL_000624 | 653303..653701 [-], 399 | 375134242 | hypothetical protein | |
6 | BDGL_000625 | 653847..656966 [+], 3120 | 375134243 | hypothetical protein | TssI |
7 | BDGL_000626 | 656963..658396 [+], 1434 | 375134244 | hypothetical protein | |
8 | BDGL_000627 | 658399..659478 [+], 1080 | 375134245 | hypothetical protein | |
9 | BDGL_000628 | 659643..661337 [+], 1695 | 375134246 | hypothetical protein | |
10 | BDGL_000629 | 661354..661884 [+], 531 | 375134247 | hypothetical protein | |
11 | BDGL_000630 | 661973..662326 [+], 354 | 375134248 | hypothetical protein | |
12 | BDGL_000631 | 662289..662471 [+], 183 | 375134249 | hypothetical protein | |
13 | BDGL_000632 | 662712..665282 [+], 2571 | 375134250 | hypothetical protein | TssI |
14 | BDGL_000633 | 665284..666204 [+], 921 | 375134251 | hypothetical protein | |
15 | BDGL_000634 | 666197..668938 [+], 2742 | 375134252 | hypothetical protein | |
16 | BDGL_000635 | 668949..669683 [+], 735 | 375134253 | hypothetical protein | |
17 | BDGL_000636 | 669735..670511 [+], 777 | 375134254 | hypothetical protein | |
18 | BDGL_000637 | 670528..671433 [+], 906 | 375134255 | hypothetical protein | |
19 | BDGL_000638 | 672126..672815 [+], 690 | 375134256 | hypothetical protein | |
20 | BDGL_000639 | 672832..673335 [+], 504 | 375134257 | hypothetical protein | TssB |
21 | BDGL_000640 | 673328..674809 [+], 1482 | 375134258 | hypothetical protein | TssC |
22 | BDGL_000641 | 674859..675362 [+], 504 | 375134259 | hypothetical protein | TssD |
23 | BDGL_000642 | 675441..675917 [+], 477 | 375134260 | hypothetical protein | TssE |
24 | BDGL_000643 | 675932..677743 [+], 1812 | 375134261 | hypothetical protein | TssF |
25 | BDGL_000644 | 677707..678705 [+], 999 | 375134262 | hypothetical protein | TssG |
26 | BDGL_000645 | 678702..680111 [+], 1410 | 375134263 | hypothetical protein | |
27 | BDGL_000646 | 680214..680534 [+], 321 | 375134264 | hypothetical protein | TssM |
28 | BDGL_000647 | 680503..683370 [+], 2868 | 375134265 | hypothetical protein | TssM |
29 | BDGL_000648 | 683357..683920 [+], 564 | 375134266 | hypothetical protein | TssM |
30 | BDGL_000649 | 683958..684917 [+], 960 | 375134267 | hypothetical protein | |
31 | BDGL_000650 (motB) | 684920..685687 [+], 768 | 375134268 | OmpA/MotB domain-containing protein | TagL |
32 | BDGL_000651 | 685715..685837 [-], 123 | 375134269 | hypothetical protein | |
33 | BDGL_000652 (clpV1) | 686116..688797 [+], 2682 | 375134270 | ClpA/B type protease | TssH |
34 | BDGL_000653 | 688820..689914 [+], 1095 | 375134271 | hypothetical protein | TssA |
35 | BDGL_000654 | 689931..691295 [+], 1365 | 375134272 | hypothetical protein | TssK |
36 | BDGL_000655 | 691313..692119 [+], 807 | 375134273 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B | TssL |
37 | BDGL_000656 | 692132..692752 [+], 621 | 375134274 | hypothetical protein | |
38 | BDGL_000657 | 692796..693713 [+], 918 | 375134275 | hypothetical protein | |
39 | BDGL_000658 | 693710..694396 [-], 687 | 375134276 | hypothetical protein | |
40 | BDGL_000659 | 694711..695358 [+], 648 | 375134277 | ankyrin | |
41 | BDGL_000660 (guaD) | 695375..695812 [+], 438 | 375134278 | guanine deaminase (Guanase) | |
42 | BDGL_000661 (cynX) | 695857..697038 [+], 1182 | 375134279 | MFS transporter; MFS transporter cyanate permease family | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein