 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | KOX_22380 | 4814841..4815911 [-], 1071 | 375261265 | ABC transporter | |
2 | KOX_22385 | 4815904..4817673 [-], 1770 | 375261266 | putative ABC transport system inner membrane permease | |
3 | KOX_22390 | 4817745..4818833 [-], 1089 | 375261267 | extracellular solute-binding protein | |
4 | KOX_22395 | 4819038..4819184 [-], 147 | 375261268 | hypothetical protein | |
5 | KOX_22400 | 4819335..4819805 [-], 471 | 375261269 | type VI secretion system protein VasD | TssJ |
6 | KOX_22405 | 4819858..4820943 [-], 1086 | 375261270 | type VI secretion system protein ImpH | TssG |
7 | KOX_22410 | 4820907..4822661 [-], 1755 | 375261271 | type VI secretion protein | TssF |
8 | KOX_22415 | 4823015..4823242 [-], 228 | 375261272 | hypothetical protein | |
9 | KOX_22420 | 4823310..4823507 [+], 198 | 375261273 | hypothetical protein | |
10 | KOX_22425 | 4823529..4826999 [-], 3471 | 375261274 | type VI secretion system protein ImpL | TssM |
11 | KOX_22430 | 4826996..4828219 [-], 1224 | 375261275 | hypothetical protein | |
12 | KOX_22435 | 4828306..4829124 [-], 819 | 375261276 | hypothetical protein | |
13 | KOX_22440 | 4829158..4829958 [-], 801 | 375261277 | hypothetical protein | |
14 | KOX_22445 | 4829992..4830792 [-], 801 | 375261278 | hypothetical protein | |
15 | KOX_22450 | 4830826..4831626 [-], 801 | 375261279 | hypothetical protein | |
16 | KOX_22455 | 4831660..4832466 [-], 807 | 375261280 | hypothetical protein | |
17 | KOX_22460 | 4832478..4835615 [-], 3138 | 375261281 | hypothetical protein | |
18 | KOX_22465 | 4835663..4836370 [-], 708 | 375261282 | hypothetical protein | |
19 | KOX_22470 | 4836462..4837214 [-], 753 | 375261283 | hypothetical protein | |
20 | KOX_22475 | 4837319..4838140 [-], 822 | 375261284 | hypothetical protein | |
21 | KOX_22480 | 4838164..4838904 [-], 741 | 375261285 | hypothetical protein | |
22 | KOX_22485 | 4839005..4842130 [-], 3126 | 375261286 | hypothetical protein | |
23 | KOX_22490 | 4842155..4843027 [-], 873 | 375261287 | hypothetical protein | |
24 | KOX_22495 | 4843027..4845369 [-], 2343 | 375261288 | hypothetical protein | TssI |
25 | KOX_22500 | 4845366..4845731 [-], 366 | 375261289 | ClpV | |
26 | KOX_22505 | 4846018..4846158 [-], 141 | 375261290 | hypothetical protein | TssD |
27 | KOX_22510 | 4846160..4846510 [-], 351 | 375261291 | hypothetical protein | TssD |
28 | KOX_22515 | 4846515..4848227 [-], 1713 | 375261292 | OmpA/MotB domain-containing protein | TagL |
29 | KOX_22520 | 4848224..4848913 [-], 690 | 375261293 | putative OmpA-family membrane protein | TssL |
30 | KOX_22525 | 4848910..4850250 [-], 1341 | 375261294 | hypothetical protein | TssK |
31 | KOX_22530 | 4850271..4851809 [-], 1539 | 375261295 | type VI secretion protein EvpB | TssC |
32 | KOX_22535 | 4851844..4852335 [-], 492 | 375261296 | type VI secretion system protein ImpB | TssB |
33 | KOX_22540 | 4853195..4854277 [+], 1083 | 375261297 | putative dehydrogenase | |
34 | KOX_22545 | 4854514..4856664 [+], 2151 | 375261298 | formate dehydrogenase subunit alpha | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein