I. Summary
Component | TssH | TssD | TssL | TssI | TssA | TssB | TssC | TssE | TssF |
Number | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 |
Component | TssG | TssJ | TssK | TssM |
Number | 1 | 1 | 1 | 1 |
 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | AZOLI_0994 | 922333..922515 [+], 183 | 374291533 | hypothetical protein | |
2 | AZOLI_0998 | 923584..925593 [-], 2010 | 374291534 | putative serine/threonine protein kinase; type VI secretion associated protein | |
3 | AZOLI_0999 | 925575..929216 [-], 3642 | 374291535 | putative Type VI secretion protein IcmF-like | TssM |
4 | AZOLI_1000 | 929220..930746 [-], 1527 | 374291536 | hypothetical protein | TssL |
5 | AZOLI_1001 | 930743..931426 [-], 684 | 374291537 | hypothetical protein | TssJ |
6 | AZOLI_1002 | 931670..932407 [+], 738 | 374291538 | hypothetical protein | |
7 | AZOLI_1003 | 932430..933971 [-], 1542 | 374291539 | putative methylase | |
8 | AZOLI_1004 | 934133..935218 [-], 1086 | 374291540 | hypothetical protein | TssG |
9 | AZOLI_1005 | 935182..937014 [-], 1833 | 374291541 | hypothetical protein | TssF |
10 | AZOLI_1006 | 937007..937483 [-], 477 | 374291542 | hypothetical protein | TssE |
11 | AZOLI_1007 | 937662..938459 [-], 798 | 374291543 | putative avirulence protein (ImpE-like) involved in protein secretion | TagJ |
12 | AZOLI_1008 | 938510..940060 [-], 1551 | 374291544 | hypothetical protein | TssC |
13 | AZOLI_1009 | 940068..941561 [-], 1494 | 374291545 | hypothetical protein | TssC |
14 | AZOLI_1010 | 941566..942072 [-], 507 | 374291546 | hypothetical protein | TssB |
15 | AZOLI_1011 | 942117..943259 [-], 1143 | 374291547 | hypothetical protein | TssA |
16 | AZOLI_1012 | 943618..943836 [+], 219 | 374291548 | hypothetical protein | |
17 | AZOLI_1013 | 943854..944237 [+], 384 | 374291549 | hypothetical protein | PAAR |
18 | AZOLI_1014 | 944242..945309 [+], 1068 | 374291550 | hypothetical protein | |
19 | AZOLI_1015 (clpB3) | 945499..948189 [+], 2691 | 374291551 | ATP-dependent chaperone; type VI secretion associated protein | TssH |
20 | AZOLI_1016 | 948342..948818 [+], 477 | 374291552 | hypothetical protein | TssD |
21 | AZOLI_1018 | 948964..951084 [+], 2121 | 374291553 | hypothetical protein | TssI |
22 | AZOLI_1019 | 951131..951718 [+], 588 | 374291554 | hypothetical protein | |
23 | AZOLI_1020 | 951723..952979 [+], 1257 | 374291555 | putative SMAD/FHA domain; type VI secretion machinery component | Fha |
24 | AZOLI_1021 | 953035..954369 [+], 1335 | 374291556 | hypothetical protein | TssK |
25 | AZOLI_1022 | 954400..955158 [+], 759 | 374291557 | hypothetical protein | |
26 | AZOLI_1023 | 955155..957323 [+], 2169 | 374291558 | putative permease of the major facilitator superfamily | |
27 | AZOLI_1024 | 957320..958402 [+], 1083 | 374291559 | putative ABC transporter; periplasmic component | |
28 | AZOLI_1025 | 958399..959223 [+], 825 | 374291560 | hypothetical protein | |
|

Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein
V. Investigation of the genomic context of the T6SS gene cluster.