 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | vfu_B00773 | 803889..804182 [-], 294 | 375132899 | hypothetical protein | |
2 | vfu_B00774 | 804418..805266 [+], 849 | 375132900 | pirin family protein | |
3 | vfu_B00775 | 805426..806112 [-], 687 | 375132901 | two-component response regulator | |
4 | vfu_B00777 | 806392..807186 [-], 795 | 375132902 | sensor signal transduction histidine kinase | |
5 | vfu_B00778 | 807188..807793 [-], 606 | 375132903 | sensor signal transduction histidine kinase | |
6 | vfu_B00779 | 807787..808590 [-], 804 | 375132904 | Cyclic nucleotide-binding:Protein kinase | |
7 | vfu_B00780 | 808587..811997 [-], 3411 | 375132905 | hypothetical protein | TssM |
8 | vfu_B00781 | 812010..813227 [-], 1218 | 375132906 | hypothetical protein | TssL |
9 | vfu_B00782 | 813232..814521 [-], 1290 | 375132907 | hypothetical protein | TssK |
10 | vfu_B00783 | 814568..815083 [-], 516 | 375132908 | lipoprotein | TssJ |
11 | vfu_B00784 | 815080..816069 [-], 990 | 375132909 | hypothetical protein | Fha |
12 | vfu_B00785 | 816078..816812 [-], 735 | 375132910 | hypothetical protein | |
13 | vfu_B00786 | 816809..818377 [-], 1569 | 375132911 | ATP-dependent Clp protease ATP-binding subunit | TssH |
14 | vfu_B00787 | 818432..819343 [-], 912 | 375132912 | ATP-dependent Clp protease ATP-binding subunit | TssH |
15 | vfu_B00788 | 819393..820418 [-], 1026 | 375132913 | hypothetical protein | TssG |
16 | vfu_B00789 | 820409..822184 [-], 1776 | 375132914 | hypothetical protein | TssF |
17 | vfu_B00790 | 822177..822599 [-], 423 | 375132915 | GPW / gp25 family | TssE |
18 | vfu_B00791 | 822596..824020 [-], 1425 | 375132916 | hypothetical protein | TssC |
19 | vfu_B00792 | 824049..825527 [-], 1479 | 375132917 | hypothetical protein | TssC |
20 | vfu_B00793 | 825524..826030 [-], 507 | 375132918 | hypothetical protein | TssB |
21 | vfu_B00794 | 826054..826578 [-], 525 | 375132919 | hypothetical protein | |
22 | vfu_B00795 | 826729..828063 [-], 1335 | 375132920 | hypothetical protein | TssA |
23 | vfu_B00796 | 828096..829175 [-], 1080 | 375132921 | hypothetical protein | |
24 | vfu_B00797 | 829228..829518 [-], 291 | 375132922 | PAAR repeat-containing protein | PAAR |
25 | vfu_B00798 | 829518..830099 [-], 582 | 375132923 | hypothetical protein | |
26 | vfu_B00799 | 830102..832165 [-], 2064 | 375132924 | hypothetical protein | TssI |
27 | vfu_B00800 | 832205..833212 [-], 1008 | 375132925 | ABC transporter substrate-binding protein | |
28 | vfu_B00801 | 833209..835320 [-], 2112 | 375132926 | major facilitator superfamily protein | |
29 | vfu_B00802 | 835317..836123 [-], 807 | 375132927 | hypothetical protein | |
30 | vfu_B00803 | 836508..836789 [-], 282 | 375132928 | hypothetical protein | |
|
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein