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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | PSE_1849 | 1951029..1951295 [+], 267 | 374330197 | hypothetical protein | |
2 | PSE_1850 | 1951410..1951913 [-], 504 | 374330198 | hypothetical protein | |
3 | PSE_1851 | 1952398..1952826 [-], 429 | 374330199 | transcriptional regulator, AsnC family | |
4 | PSE_1852 | 1952973..1954115 [+], 1143 | 374330200 | amidohydrolase family protein | |
5 | PSE_1853 (ygeX) | 1954129..1955298 [+], 1170 | 374330201 | Diaminopropionate ammonia-lyase | |
6 | PSE_1854 (impA) | 1955327..1956751 [-], 1425 | 374330202 | ImpA domain-containing protein | TssA |
7 | PSE_1855 (icmF) | 1956757..1960158 [-], 3402 | 374330203 | Type VI secretion protein IcmF | TssM |
8 | PSE_1856 | 1960615..1961124 [+], 510 | 374330204 | hypothetical protein | TssB |
9 | PSE_1857 (evpB) | 1961221..1962714 [+], 1494 | 374330205 | type VI secretion protein EvpB | TssC |
10 | PSE_1858 | 1962784..1963182 [+], 399 | 374330206 | Type VI secretion system, lysozyme-related protein | TssE |
11 | PSE_1859 | 1963201..1964988 [+], 1788 | 374330207 | Type VI secretion system | TssF |
12 | PSE_1860 | 1964997..1965986 [+], 990 | 374330208 | hypothetical protein | TssG |
13 | PSE_1861 (fha) | 1965995..1967494 [+], 1500 | 374330209 | FHA domain-containing protein | Fha |
14 | PSE_1862 | 1967560..1968120 [+], 561 | 374330210 | hypothetical protein | TssJ |
15 | PSE_1863 | 1968228..1969499 [+], 1272 | 374330211 | hypothetical protein | TssK |
16 | PSE_1864 (dotU) | 1969496..1970317 [+], 822 | 374330212 | Type IV / VI secretion system DotU | TssL |
17 | PSE_1865 (clpV1) | 1970333..1973032 [+], 2700 | 374330213 | ATPase, type VI secretion system ClpV1 | TssH |
18 | PSE_1866 | 1973073..1974608 [+], 1536 | 374330214 | Nif-specific regulatory protein | |
19 | PSE_1867 | 1974674..1975468 [+], 795 | 374330215 | hypothetical protein | |
20 | PSE_1868 | 1975498..1976397 [+], 900 | 374330216 | pentapeptide repeat-containing protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein