 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | PSE_2843 | 3032440..3035139 [-], 2700 | 374331189 | hypothetical protein | |
2 | PSE_2844 (icmF) | 3035230..3038859 [-], 3630 | 374331190 | Type VI secretion protein IcmF | TssM |
3 | PSE_2845 (dotU) | 3038856..3040196 [-], 1341 | 374331191 | Type IV / VI secretion system, DotU/OmpA/MotB | TssL |
4 | PSE_2846 | 3040306..3041643 [-], 1338 | 374331192 | hypothetical protein | TssK |
5 | PSE_2847 | 3041643..3042056 [-], 414 | 374331193 | hypothetical protein | TssJ |
6 | PSE_2848 (fha) | 3042127..3042786 [-], 660 | 374331194 | FHA domain-containing protein | Fha |
7 | PSE_2849 | 3042947..3043063 [-], 117 | 374331195 | hypothetical protein | PAAR |
8 | PSE_2850 | 3043234..3043800 [-], 567 | 374331196 | hypothetical protein | |
9 | PSE_2851 | 3043836..3045944 [-], 2109 | 374331197 | Rhs element Vgr protein | TssI |
10 | PSE_2852 | 3045986..3046279 [-], 294 | 374331198 | hypothetical protein | |
11 | PSE_2853 | 3046289..3048286 [-], 1998 | 374331199 | hypothetical protein | TssC |
12 | PSE_2854 | 3048279..3049007 [-], 729 | 374331200 | voltage-gated sodium channel | |
13 | PSE_2855 (clpV) | 3049297..3051891 [-], 2595 | 374331201 | type VI secretion ATPase, ClpV1 family | TssH |
14 | PSE_2856 | 3051987..3053153 [-], 1167 | 374331202 | hypothetical protein | TssG |
15 | PSE_2857 | 3053150..3055027 [-], 1878 | 374331203 | Type VI secretion system | TssF |
16 | PSE_2858 | 3055029..3055535 [-], 507 | 374331204 | Type VI secretion system, lysozyme-related protein | TssE |
17 | PSE_2859 (sciE) | 3055528..3056379 [-], 852 | 374331205 | virulence protein, SciE type | TagJ |
18 | PSE_2860 (sciM) | 3056463..3056993 [-], 531 | 374331206 | SciM protein | TssD |
19 | PSE_2861 (sciI) | 3057127..3058632 [-], 1506 | 374331207 | Cytoplasmic protein SciI | TssC |
20 | PSE_2862 (sciH) | 3058625..3059047 [-], 423 | 374331208 | Cytoplasmic protein SciH | TssB |
21 | PSE_2863 (impA) | 3059201..3060247 [-], 1047 | 374331209 | ImpA domain-containing protein | TssA |
22 | PSE_2864 | 3061211..3062080 [-], 870 | 374331210 | hypothetical protein | |
23 | PSE_2865 | 3062300..3063475 [-], 1176 | 374331211 | hypothetical protein | |
24 | PSE_2866 | 3063505..3064890 [-], 1386 | 374331212 | cytochrome P450 family protein | |
|
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein