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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | VVA0972 | 1076153..1076743 [+], 591 | 37676632 | hypothetical protein | |
2 | VVA0973 | 1076743..1078596 [+], 1854 | 37676633 | Zn-dependent protease with chaperone function | |
3 | VVA0974 | 1078696..1078821 [-], 126 | 37676634 | hypothetical protein | |
4 | VVA0975 | 1078940..1080304 [+], 1365 | 37676635 | hypothetical protein | |
5 | VVA0976 | 1081034..1085530 [-], 4497 | 37676636 | Rhs family protein | |
6 | VVA0977 | 1085531..1086439 [-], 909 | 37676637 | hypothetical protein | |
7 | VVA0978 | 1086740..1088575 [-], 1836 | 37676638 | hypothetical protein | TssI |
8 | VVA0979 | 1088630..1089109 [-], 480 | 37676639 | hemolysin-coregulated protein | TssD |
9 | VVA0980 | 1089325..1091889 [-], 2565 | 37676640 | chaperone ATPase | TssH |
10 | VVA0981 | 1091903..1092904 [-], 1002 | 37676641 | hypothetical protein | TssG |
11 | VVA0982 | 1092868..1094694 [-], 1827 | 37676642 | hypothetical protein | TssF |
12 | VVA0983 | 1094691..1095164 [-], 474 | 37676643 | hypothetical protein | TssE |
13 | VVA0984 | 1095161..1095964 [-], 804 | 37676644 | hypothetical protein | TagJ |
14 | VVA0985 | 1095975..1097582 [-], 1608 | 37676645 | hypothetical protein | TssC |
15 | VVA0986 | 1097513..1099006 [-], 1494 | 37676646 | hypothetical protein | TssC |
16 | VVA0987 | 1099018..1099530 [-], 513 | 37676647 | hypothetical protein | TssB |
17 | VVA0988 | 1099547..1100680 [-], 1134 | 37676648 | hypothetical protein | TssA |
18 | VVA0989 | 1100680..1101552 [-], 873 | 37676649 | phosphoprotein phosphatase | |
19 | VVA0990 | 1101485..1102180 [-], 696 | 37676650 | hypothetical protein | |
20 | VVA0991 | 1102162..1105686 [-], 3525 | 37676651 | hypothetical protein | TssM |
21 | VVA0992 | 1105664..1106992 [-], 1329 | 37676652 | hypothetical protein | TssL |
22 | VVA0993 | 1107001..1108323 [-], 1323 | 37676653 | hypothetical protein | TssK |
23 | VVA0994 | 1108347..1108802 [-], 456 | 37676654 | hypothetical protein | TssJ |
24 | VVA0995 | 1108803..1110107 [-], 1305 | 37676655 | hypothetical protein | Fha |
25 | VVA0996 | 1110336..1112504 [+], 2169 | 37676656 | hypothetical protein | |
26 | VVA0997 | 1112568..1113185 [-], 618 | 37676657 | glutathione S-transferase | |
27 | VVA0998 | 1113286..1113873 [+], 588 | 37676658 | transcriptional regulator | |
28 | VVA0999 | 1113870..1114265 [+], 396 | 37676659 | DNA-binding protein | |
29 | VVA1000 | 1114272..1114535 [-], 264 | 37676660 | hypothetical protein | |
30 | VVA1001 | 1114568..1114873 [+], 306 | 37676661 | hypothetical protein | |
31 | VVA1002 | 1114893..1115237 [-], 345 | 37676662 | hypothetical protein | |
32 | VVA1003 | 1115499..1117097 [+], 1599 | 37676663 | signal transduction protein | |
33 | VVA1004 (phhB) | 1117197..1117529 [-], 333 | 37676664 | pterin-4-alpha-carbinolamine dehydratase | |
34 | VVA1005 (phhA) | 1117522..1118316 [-], 795 | 37676665 | phenylalanine 4-monooxygenase | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein