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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | PSF113_5789 (ppkA) | 6667897..6671007 [-], 3111 | 378953670 | protein PpkA | PpkA |
2 | PSF113_5790 (pppA) | 6671004..6671681 [-], 678 | 378953671 | protein PppA | PppA |
3 | PSF113_5791 (impM) | 6671736..6672389 [-], 654 | 378953672 | protein ImpM | TagF |
4 | PSF113_5792 (icmF1) | 6672386..6675886 [-], 3501 | 378953673 | protein IcmF1 | TssM |
5 | PSF113_5793 (impK) | 6675883..6677193 [-], 1311 | 378953674 | protein ImpK | TssL |
6 | PSF113_5794 (impJ2) | 6677200..6678534 [-], 1335 | 378953675 | protein ImpJ | TssK |
7 | PSF113_5795 (vasD) | 6678550..6679056 [-], 507 | 378953676 | protein VasD | TssJ |
8 | PSF113_5796 (impI) | 6679125..6680555 [-], 1431 | 378953677 | protein ImpI | Fha |
9 | PSF113_5797 (impA2) | 6681052..6682089 [+], 1038 | 378953678 | protein ImpA | TssA |
10 | PSF113_5798 (impB2) | 6682171..6682677 [+], 507 | 378953679 | protein ImpB | TssB |
11 | PSF113_5799 (impC2) | 6682674..6684176 [+], 1503 | 378953680 | protein ImpC | TssC |
12 | PSF113_5800 (impD2) | 6684399..6684887 [+], 489 | 378953681 | protein ImpD | TssD |
13 | PSF113_5801 | 6684969..6685418 [+], 450 | 378953682 | hypothetical protein | |
14 | PSF113_5802 | 6685607..6685855 [+], 249 | 378953683 | hypothetical protein | |
15 | PSF113_5803 (impF2) | 6685849..6686361 [+], 513 | 378953684 | protein ImpF | TssE |
16 | PSF113_5804 (impG2) | 6686358..6688217 [+], 1860 | 378953685 | protein ImpG | TssF |
17 | PSF113_5805 (impH2) | 6688232..6689230 [+], 999 | 378953686 | protein ImpH | TssG |
18 | PSF113_5806 (clpB3) | 6689223..6691913 [+], 2691 | 378953687 | chaperone ClpB | TssH |
19 | PSF113_5807 (vgrG1a) | 6692072..6694009 [+], 1938 | 378953688 | protein VgrG1a | TssI |
20 | PSF113_5808 | 6694028..6694462 [+], 435 | 378953689 | hypothetical protein | |
21 | PSF113_5809 | 6694475..6698914 [+], 4440 | 378953690 | Rhs-family protein | PAAR |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein