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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | Rahaq2_4857 | 311310..311753 [-], 444 | 379704209 | putative ester cyclase | |
2 | Rahaq2_4858 | 311872..312786 [+], 915 | 379704210 | transcriptional regulator | |
3 | Rahaq2_4859 | 312875..313735 [-], 861 | 379704211 | putative oxidoreductase, aryl-alcohol dehydrogenase like protein | |
4 | Rahaq2_4860 | 313831..314766 [+], 936 | 379704212 | transcriptional regulator | |
5 | Rahaq2_4862 | 315069..315644 [-], 576 | 379704213 | hypothetical protein | |
6 | Rahaq2_4863 | 316147..316626 [+], 480 | 379704214 | type VI secretion protein | TssB |
7 | Rahaq2_4864 | 316623..318104 [+], 1482 | 379704215 | type VI secretion protein EvpB | TssC |
8 | Rahaq2_4865 | 318129..318623 [+], 495 | 379704216 | hemolysin-coregulated protein | TssD |
9 | Rahaq2_4866 | 318677..319093 [+], 417 | 379704217 | hypothetical protein | TssE |
10 | Rahaq2_4867 | 319106..320908 [+], 1803 | 379704218 | type VI secretion protein | TssF |
11 | Rahaq2_4868 | 320899..321846 [+], 948 | 379704219 | type VI secretion protein | TssG |
12 | Rahaq2_4869 | 321850..323763 [+], 1914 | 379704220 | Rhs element Vgr protein | TssI |
13 | Rahaq2_4870 | 323777..324292 [+], 516 | 379704221 | hypothetical protein | |
14 | Rahaq2_4871 | 324292..324591 [+], 300 | 379704222 | hypothetical protein | PAAR |
15 | Rahaq2_4872 | 324603..325667 [+], 1065 | 379704223 | type VI secretion-associated protein, ImpA family | TssA |
16 | Rahaq2_4873 | 325694..326239 [+], 546 | 379704224 | hypothetical protein | TssJ |
17 | Rahaq2_4874 | 326239..327633 [+], 1395 | 379704225 | type VI secretion protein | TssK |
18 | Rahaq2_4875 | 327630..328253 [+], 624 | 379704226 | hypothetical protein | TssL |
19 | Rahaq2_4876 | 328257..331694 [+], 3438 | 379704227 | hypothetical protein | TssM |
20 | Rahaq2_4877 | 331740..334310 [+], 2571 | 379704228 | type VI secretion ATPase, ClpV1 family | TssH |
21 | Rahaq2_4878 | 334331..335668 [+], 1338 | 379704229 | hypothetical protein | TssA |
22 | Rahaq2_4879 | 335739..336494 [+], 756 | 379704230 | hypothetical protein | |
23 | Rahaq2_4880 | 336657..338531 [+], 1875 | 379704231 | potassium uptake protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein