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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | EKO11_0924 | 966968..968221 [+], 1254 | 378711736 | cell wall hydrolase/autolysin | |
2 | EKO11_0925 | 968567..969115 [-], 549 | 378711737 | hypothetical protein | |
3 | EKO11_0926 | 969180..970556 [-], 1377 | 378711738 | ImpA domain-containing protein | TssA |
4 | EKO11_0927 | 970556..970984 [-], 429 | 378711739 | type VI secretion system lysozyme-like protein | TssE |
5 | EKO11_0928 | 970988..971524 [-], 537 | 378711740 | type VI secretion lipoprotein | TssJ |
6 | EKO11_0929 | 971505..972584 [-], 1080 | 378711741 | type VI secretion protein | TssG |
7 | EKO11_0930 | 972548..974308 [-], 1761 | 378711742 | type VI secretion protein | TssF |
8 | EKO11_0931 | 974868..975290 [-], 423 | 378711743 | hypothetical protein | |
9 | EKO11_0933 | 976316..976627 [+], 312 | 378711744 | transposase IS3/IS911 family protein | |
10 | EKO11_0935 | 977968..979326 [-], 1359 | 378711745 | type VI secretion-associated protein | TssA |
11 | EKO11_0937 | 979871..979978 [-], 108 | 378711746 | hypothetical protein | |
12 | EKO11_0938 | 980428..981345 [-], 918 | 378711747 | hypothetical protein | PAAR |
13 | EKO11_0939 | 981351..982988 [-], 1638 | 378711748 | type VI secretion-associated protein | TssA |
14 | EKO11_0940 | 982954..986343 [-], 3390 | 378711749 | ImcF domain-containing protein | TssM |
15 | EKO11_0941 | 986343..987557 [-], 1215 | 378711750 | hypothetical protein | |
16 | EKO11_0942 | 987635..988117 [-], 483 | 378711751 | hypothetical protein | |
17 | EKO11_0944 | 988810..991317 [-], 2508 | 378711752 | Rhs element Vgr protein | TssI |
18 | EKO11_0945 | 991642..992178 [-], 537 | 378711753 | hypothetical protein | |
19 | EKO11_0946 | 992168..993019 [-], 852 | 378711754 | hypothetical protein | |
20 | EKO11_0947 | 993021..995507 [-], 2487 | 378711755 | Rhs element Vgr protein | TssI |
21 | EKO11_0948 | 995519..998164 [-], 2646 | 378711756 | type VI secretion ATPase, ClpV1 family | TssH |
22 | EKO11_0949 | 998355..998846 [-], 492 | 378711757 | type VI secretion system effector | TssD |
23 | EKO11_0950 | 998904..1000556 [-], 1653 | 378711758 | OmpA/MotB domain-containing protein | TagL |
24 | EKO11_0951 | 1000569..1001234 [-], 666 | 378711759 | DotU family type IV / VI secretion system protein | TssL |
25 | EKO11_0952 | 1001231..1002568 [-], 1338 | 378711760 | type VI secretion protein | TssK |
26 | EKO11_0953 | 1002586..1004124 [-], 1539 | 378711761 | type VI secretion protein EvpB | TssC |
27 | EKO11_0954 | 1004183..1004683 [-], 501 | 378711762 | type VI secretion protein | TssB |
28 | EKO11_0956 | 1006777..1007583 [+], 807 | 378711763 | UBA/THIF-type NAD/FAD binding protein | |
29 | EKO11_0957 | 1007634..1008077 [-], 444 | 378711764 | cysteine desulfurase, sulfur acceptor subunit CsdE | |
30 | EKO11_0958 | 1008077..1009282 [-], 1206 | 378711765 | class V aminotransferase | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein