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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | YP_1345 | 1475925..1476245 [+], 321 | 45441171 | hypothetical protein | |
2 | YP_1346 (fabZ1) | 1476509..1477033 [+], 525 | 45441172 | myristoyl-acyl carrier dehydratase | |
3 | YP_1347 (fabF3) | 1477023..1478306 [+], 1284 | 45441173 | 3-ketoacyl-ACP synthase | |
4 | YP_1348 (fabG6) | 1478254..1479045 [+], 792 | 45441174 | 3-ketoacyl-ACP reductase | |
5 | YP_1349 (pksG) | 1479061..1480299 [+], 1239 | 45441175 | hydroxymethylglutaryl-coenzyme A synthase | |
6 | YP_1350 (caiD1) | 1480241..1481011 [+], 771 | 45441176 | enoyl-CoA hydratase | |
7 | YP_1351 (caiD2) | 1480989..1481765 [+], 777 | 45441177 | polyketide biosynthesis enoyl-CoA hydratase | |
8 | YP_1352 (fabG7) | 1481768..1482556 [+], 789 | 45441178 | short chain dehydrogenase | |
9 | YP_1353 | 1482595..1483083 [+], 489 | 45441179 | hypothetical protein | |
10 | YP_1354 (acpP1) | 1483121..1483369 [+], 249 | 45441180 | acyl carrier protein | |
11 | YP_1355 (fabD1) | 1483468..1484316 [+], 849 | 45441181 | acyl transferase | |
12 | YP_1356 | 1485302..1485805 [+], 504 | 45441182 | hypothetical protein | TssB |
13 | YP_1357 | 1485848..1487392 [+], 1545 | 45441183 | hypothetical protein | TssC |
14 | YP_1358 | 1487404..1488756 [+], 1353 | 45441184 | hypothetical protein | TssK |
15 | YP_1359 | 1488753..1489439 [+], 687 | 45441185 | hypothetical protein | TssL |
16 | YP_1360 (ompA2) | 1489439..1491175 [+], 1737 | 45441186 | hypothetical protein | TagL |
17 | YP_1361 (hcp3) | 1491179..1491670 [+], 492 | 45441187 | hemolysin-coregulated protein | TssD |
18 | YP_1362 (clpA2) | 1492058..1494700 [+], 2643 | 45441188 | ATPase subunit of ATP-dependent protease | TssH |
19 | YP_1363 (vgrG1) | 1494703..1497051 [+], 2349 | 45441189 | hypothetical protein | TssI |
20 | YP_1364 | 1497067..1499367 [+], 2301 | 45441190 | hypothetical protein | |
21 | YP_1365 (uvrA2) | 1499364..1500137 [+], 774 | 45441191 | hypothetical protein | |
22 | YP_1366 (mdlB3) | 1500291..1500551 [+], 261 | 45441192 | ABC-type multidrug/protein/lipid transport system, ATPase | |
23 | YP_1367 | 1500567..1502750 [+], 2184 | 45441193 | hypothetical protein | |
24 | YP_1368 | 1502923..1503393 [+], 471 | 45441194 | hypothetical protein | |
25 | YP_1369 | 1504126..1504446 [-], 321 | 45441195 | transposase | |
26 | YP_1370 | 1505669..1506790 [+], 1122 | 45441196 | hypothetical protein | |
27 | YP_1371 (icmF1) | 1506787..1510209 [+], 3423 | 45441197 | hypothetical protein | TssM |
28 | YP_1373 | 1511844..1512929 [+], 1086 | 45441198 | hypothetical protein | PAAR |
29 | YP_1374 | 1512929..1513399 [+], 471 | 45441199 | hypothetical protein | |
30 | YP_1375 | 1513620..1515383 [+], 1764 | 45441200 | hypothetical protein | TssF |
31 | YP_1376 | 1515347..1516432 [+], 1086 | 45441201 | hypothetical protein | TssG |
32 | YP_1377 | 1516407..1516988 [+], 582 | 45441202 | hypothetical protein | TssJ |
33 | YP_1378 | 1516988..1517440 [+], 453 | 45441203 | hypothetical protein | TssE |
34 | YP_1379 | 1517465..1518832 [+], 1368 | 45441204 | hypothetical protein | TssA |
35 | YP_1380 | 1519044..1519667 [-], 624 | 45441205 | hypothetical protein | |
36 | YP_1381 (uup3) | 1520182..1521945 [+], 1764 | 45441206 | ABC transporter ATP-binding protein | |
37 | YP_1382 | 1522173..1522817 [+], 645 | 45441207 | hypothetical protein | |
38 | YP_1383 | 1522839..1524047 [-], 1209 | 45441208 | transposase for the IS285 insertion element | |
39 | YP_1384 (moeB) | 1524214..1525014 [-], 801 | 45441209 | molybdopterin biosynthesis protein MoeB | |
40 | YP_1385 (moeA) | 1524986..1526260 [-], 1275 | 45441210 | molybdopterin biosynthesis protein MoeA | |
41 | YP_1386 (aslB1) | 1526795..1528105 [-], 1311 | 45441211 | heme-binding protein | |
42 | YP_1387 (phnL3) | 1528115..1528783 [-], 669 | 45441212 | ABC transporter ATP-binding protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein