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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | Q7S_23326 | 117356..118903 [+], 1548 | 384527695 | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor | |
2 | Q7S_23331 | 118976..120523 [-], 1548 | 384527696 | methyl-accepting chemotaxis sensory transducer | |
3 | Q7S_23336 | 121369..121863 [+], 495 | 384527697 | type VI secretion protein | TssB |
4 | Q7S_23341 | 121895..123442 [+], 1548 | 384527698 | type VI secretion protein EvpB | TssC |
5 | Q7S_23346 | 123494..124807 [+], 1314 | 384527699 | type VI secretion protein | TssK |
6 | Q7S_23351 | 124804..125478 [+], 675 | 384527700 | DotU family type IV / VI secretion system protein | TssL |
7 | Q7S_23356 | 125480..127156 [+], 1677 | 384527701 | OmpA/MotB domain-containing protein | TagL |
8 | Q7S_23361 | 127189..127680 [+], 492 | 384527702 | type VI secretion system effector | TssD |
9 | Q7S_23366 | 127843..130497 [+], 2655 | 384527703 | type VI secretion ATPase, ClpV1 family protein | TssH |
10 | Q7S_23371 | 130494..132836 [+], 2343 | 384527704 | Rhs element Vgr protein | TssI |
11 | Q7S_23376 | 132951..133466 [+], 516 | 384527705 | hypothetical protein | |
12 | Q7S_23381 | 133483..136971 [+], 3489 | 384527706 | hypothetical protein | |
13 | Q7S_23386 | 136987..137544 [+], 558 | 384527707 | hypothetical protein | |
14 | Q7S_23391 | 137560..138009 [+], 450 | 384527708 | hypothetical protein | |
15 | Q7S_23396 | 138037..138567 [+], 531 | 384527709 | hypothetical protein | |
16 | Q7S_23401 | 138629..138892 [+], 264 | 384527710 | hypothetical protein | PAAR |
17 | Q7S_23406 | 138895..140106 [+], 1212 | 384527711 | hypothetical protein | |
18 | Q7S_23411 | 140103..143519 [+], 3417 | 384527712 | ImcF domain-containing protein | TssM |
19 | Q7S_23416 | 143619..145388 [+], 1770 | 384527713 | type VI secretion system protein ImpG | TssF |
20 | Q7S_23421 | 145352..146434 [+], 1083 | 384527714 | type VI secretion protein | TssG |
21 | Q7S_23426 | 146498..147040 [+], 543 | 384527715 | type VI secretion lipoprotein | TssJ |
22 | Q7S_23451 | 151037..151876 [+], 840 | 384527716 | ImpA domain-containing protein | |
23 | Q7S_23456 | 152173..153222 [+], 1050 | 384527717 | ImpA domain-containing protein | |
24 | Q7S_23461 | 153312..154151 [+], 840 | 384527718 | hypothetical protein | |
25 | Q7S_23466 | 154352..155956 [+], 1605 | 384527719 | type VI secretion-associated protein | TssA |
26 | Q7S_23471 | 155976..156407 [+], 432 | 384527720 | type VI secretion system lysozyme-like protein | TssE |
27 | Q7S_23476 | 156569..157378 [+], 810 | 384527721 | secreted protein | |
28 | Q7S_23481 | 157461..158855 [+], 1395 | 384527722 | ImpA domain-containing protein | TssA |
29 | Q7S_23486 | 158905..159375 [+], 471 | 384527723 | hypothetical protein | |
30 | Q7S_23491 | 159923..161347 [+], 1425 | 384527724 | cytochrome bd ubiquinol oxidase subunit I | |
31 | Q7S_23496 | 161350..162357 [+], 1008 | 384527725 | cytochrome d ubiquinol oxidase, subunit II | |
32 | Q7S_23501 | 162369..162533 [+], 165 | 384527726 | hypothetical protein | |
33 | Q7S_23506 | 162766..163344 [-], 579 | 384527727 | TetR family transcriptional regulator | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein