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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | LFE_2268 | 2331776..2332273 [-], 498 | 383785500 | hypothetical protein | |
2 | LFE_2269 | 2332755..2332955 [+], 201 | 383785501 | hypothetical protein | |
3 | LFE_2270 | 2333363..2334586 [-], 1224 | 383785502 | transposase | |
4 | LFE_2271 | 2334685..2334882 [+], 198 | 383785503 | hypothetical protein | |
5 | LFE_2272 | 2334879..2335010 [+], 132 | 383785504 | hypothetical protein | |
6 | LFE_2273 | 2335440..2335940 [+], 501 | 383785505 | hypothetical protein | TssB |
7 | LFE_2274 | 2335978..2337471 [+], 1494 | 383785506 | hypothetical protein | TssC |
8 | LFE_2275 | 2337511..2337999 [+], 489 | 383785507 | hypothetical protein | TssD |
9 | LFE_2276 | 2338013..2338429 [+], 417 | 383785508 | GPW/gp25 family protein | TssE |
10 | LFE_2277 | 2338520..2340253 [+], 1734 | 383785509 | hypothetical protein | TssF |
11 | LFE_2278 | 2340217..2341251 [+], 1035 | 383785510 | hypothetical protein | TssG |
12 | LFE_2279 | 2341248..2343908 [+], 2661 | 383785511 | ATPase AAA2 domain protein | TssH |
13 | LFE_2280 | 2343914..2345416 [+], 1503 | 383785512 | Rhs element Vgr protein | TssI |
14 | LFE_2281 | 2345496..2346218 [+], 723 | 383785513 | hypothetical protein | |
15 | LFE_2282 | 2346302..2349046 [+], 2745 | 383785514 | pentapeptide repeat protein | |
16 | LFE_2283 | 2349043..2350110 [+], 1068 | 383785515 | pentapeptide repeat protein | |
17 | LFE_2284 | 2350125..2350775 [+], 651 | 383785516 | hypothetical protein | |
18 | LFE_2285 | 2350795..2351190 [+], 396 | 383785517 | hypothetical protein | |
19 | LFE_2286 | 2351222..2351905 [+], 684 | 383785518 | hypothetical protein | TssJ |
20 | LFE_2287 | 2351922..2353301 [+], 1380 | 383785519 | hypothetical protein | TssK |
21 | LFE_2288 | 2353301..2353969 [+], 669 | 383785520 | hypothetical protein | TssL |
22 | LFE_2289 | 2353986..2357828 [+], 3843 | 383785521 | hypothetical protein | TssM |
23 | LFE_2290 | 2357874..2359418 [+], 1545 | 383785522 | ImpA domain protein | TssA |
24 | LFE_2291 | 2359517..2359870 [+], 354 | 383785523 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein