I. Summary
Component | TssH | TssD | TssL | TssI | TssA | TssB | TssC | TssE | TssF |
Number | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
Component | TssG | TssJ | TssK | TssM |
Number | 1 | 1 | 1 | 1 |
 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | A1122_02485 | 544003..546909 [+], 2907 | 384137494 | ATP-dependent helicase HepA | |
2 | A1122_02490 | 546871..547017 [-], 147 | 384137495 | hypothetical protein | |
3 | A1122_02495 | 547165..547518 [-], 354 | 384137496 | hypothetical protein | |
4 | A1122_02500 | 547540..550980 [-], 3441 | 384137497 | hypothetical protein | TssM |
5 | A1122_02505 | 551042..552652 [-], 1611 | 384137498 | hypothetical protein | TssL |
6 | A1122_02510 | 552649..554004 [-], 1356 | 384137499 | hypothetical protein | TssK |
7 | A1122_02515 | 554124..554615 [-], 492 | 384137500 | putative lipoprotein | TssJ |
8 | A1122_02520 | 554608..554973 [-], 366 | 384137501 | hypothetical protein | PAAR |
9 | A1122_02525 | 554979..555596 [-], 618 | 384137502 | hypothetical protein | |
10 | A1122_02530 | 555589..556692 [-], 1104 | 384137503 | hypothetical protein | |
11 | A1122_02545 | 558878..559030 [+], 153 | 384137504 | hypothetical protein | |
12 | A1122_02550 | 558950..561298 [-], 2349 | 384137505 | Rhs element Vgr protein | TssI |
13 | A1122_02555 | 561402..563990 [-], 2589 | 384137506 | Clp ATPase | TssH |
14 | A1122_02560 | 564008..564991 [-], 984 | 384137507 | hypothetical protein | TssG |
15 | A1122_02565 | 564984..566828 [-], 1845 | 384137508 | type VI secretion protein | TssF |
16 | A1122_02570 | 566861..567304 [-], 444 | 384137509 | hypothetical protein | TssE |
17 | A1122_02575 | 567378..567896 [-], 519 | 384137510 | hypothetical protein | TssD |
18 | A1122_02580 | 568059..569570 [-], 1512 | 384137511 | hypothetical protein | TssC |
19 | A1122_02585 | 569570..570130 [-], 561 | 384137512 | hypothetical protein | TssB |
20 | A1122_02590 | 570141..571154 [-], 1014 | 384137513 | hypothetical protein | TssA |
21 | A1122_02595 | 571484..572227 [+], 744 | 384137514 | hypothetical protein | |
22 | A1122_02600 | 573450..574070 [+], 621 | 384137515 | ribosomal large subunit pseudouridine synthase A | |
23 | A1122_02605 (djlA) | 574368..575201 [-], 834 | 384137516 | Dna-J like membrane chaperone protein | |
|

Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein
V. Investigation of the genomic context of the T6SS gene cluster.