SecReT6

T6SS
Effector
Immunity
Reference

I. Summary

SecReT6 ID	581
Strain	Yersinia pestis A1122
Replicon	chromosome [Browse all T6SS(s) in this replicon]
Accession	NC_017168
Location	1619087..1652747
Comment
Function	N/A
T6SS Type	Type i; subtype i1
Bioinformatics investigation has been performed on this T6SS.

II. T6SS components

Component	TssH	TssD	TssL	TssI	TssA	TssB	TssC	TssE	TssF
Number	1	1	1	2	2	1	1	1	2
Component	TssG	TssJ	TssK	TssM
Number	1	1	1	1


III. genome coordinates of the T6SS gene cluster
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Note
1	A1122_07305	1614233..1614595 [+], 363	384138434	glycosidase
2	A1122_07310	1614583..1615692 [+], 1110	384138435	maltose/maltodextrin transporter ATP-binding protein
3	A1122_07315 (lamB)	1615763..1617034 [+], 1272	384138436	maltoporin
4	A1122_07320	1617275..1618186 [+], 912	384138437	maltose regulon periplasmic protein
5	A1122_07325	1618657..1618935 [+], 279	384138438	hypothetical protein
6	A1122_07330	1619087..1619605 [-], 519	384138439	hypothetical protein	TssD
7	A1122_07335	1620129..1620626 [+], 498	384138440	hypothetical protein	TssB
8	A1122_07340	1620694..1622175 [+], 1482	384138441	hypothetical protein	TssC
9	A1122_07345	1622182..1622622 [+], 441	384138442	hypothetical protein	TssE
10	A1122_07350	1622622..1623848 [+], 1227	384138443	type VI secretion system protein ImpG	TssF
11	A1122_07355	1623738..1624523 [-], 786	384138444	transposase for insertion sequence IS1661
12	A1122_07360	1624577..1625092 [-], 516	384138445	insertion element DNA-binding protein
13	A1122_07365	1625143..1625886 [+], 744	384138446	hypothetical protein	TssF
14	A1122_07370	1625850..1626938 [+], 1089	384138447	hypothetical protein	TssG
15	A1122_07375	1627064..1628380 [+], 1317	384138448	hypothetical protein	Fha
16	A1122_07380	1628380..1628925 [+], 546	384138449	putative lipoprotein	TssJ
17	A1122_07385	1628928..1630274 [+], 1347	384138450	hypothetical protein	TssK
18	A1122_07390	1630274..1631041 [+], 768	384138451	putative membrane protein Aec26	TssL
19	A1122_07395	1631052..1633655 [+], 2604	384138452	Clp ATPase	TssH
20	A1122_07400	1633652..1634449 [+], 798	384138453	hypothetical protein
21	A1122_07405	1634446..1635132 [+], 687	384138454	hypothetical protein
22	A1122_07410	1635138..1636526 [+], 1389	384138455	hypothetical protein	TssA
23	A1122_07415	1636558..1640091 [+], 3534	384138456	hypothetical protein	TssM
24	A1122_07420	1640216..1640998 [+], 783	384138457	hypothetical protein	TssA
25	A1122_07425	1641352..1641528 [+], 177	384138458	hypothetical protein
26	A1122_07430	1641550..1643952 [+], 2403	384138459	putative Rhs accessory genetic element	TssI
27	A1122_07435	1643958..1644416 [+], 459	384138460	hypothetical protein
28	A1122_07440	1644409..1647273 [+], 2865	384138461	hypothetical protein	PAAR
29	A1122_07445	1647301..1648671 [+], 1371	384138462	hypothetical protein
30	A1122_07450	1648673..1649158 [+], 486	384138463	hypothetical protein
31	A1122_07455	1649208..1649399 [-], 192	384138464	hypothetical protein
32	A1122_07460	1649475..1649699 [-], 225	384138465	hypothetical protein
33	A1122_07465	1649781..1650188 [-], 408	384138466	putative transcriptional regulator
34	A1122_07470	1650351..1650527 [+], 177	384138467	hypothetical protein
35	A1122_07475	1650549..1652747 [+], 2199	384138468	putative Rhs accessory genetic element	TssI
36	A1122_07480	1652750..1653172 [+], 423	384138469	hypothetical protein

Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

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Proteins Genes

V. Investigation of the genomic context of the T6SS gene cluster.

Homology Effector list

ABG57132

Effector identified
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Homolog
1	A1122_07330	1619087..1619605 [-], 519	384138439	hypothetical protein	ABG57132

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Proteins Genes

N/A