 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | A1122_07305 | 1614233..1614595 [+], 363 | 384138434 | glycosidase | |
2 | A1122_07310 | 1614583..1615692 [+], 1110 | 384138435 | maltose/maltodextrin transporter ATP-binding protein | |
3 | A1122_07315 (lamB) | 1615763..1617034 [+], 1272 | 384138436 | maltoporin | |
4 | A1122_07320 | 1617275..1618186 [+], 912 | 384138437 | maltose regulon periplasmic protein | |
5 | A1122_07325 | 1618657..1618935 [+], 279 | 384138438 | hypothetical protein | |
6 | A1122_07330 | 1619087..1619605 [-], 519 | 384138439 | hypothetical protein | TssD |
7 | A1122_07335 | 1620129..1620626 [+], 498 | 384138440 | hypothetical protein | TssB |
8 | A1122_07340 | 1620694..1622175 [+], 1482 | 384138441 | hypothetical protein | TssC |
9 | A1122_07345 | 1622182..1622622 [+], 441 | 384138442 | hypothetical protein | TssE |
10 | A1122_07350 | 1622622..1623848 [+], 1227 | 384138443 | type VI secretion system protein ImpG | TssF |
11 | A1122_07355 | 1623738..1624523 [-], 786 | 384138444 | transposase for insertion sequence IS1661 | |
12 | A1122_07360 | 1624577..1625092 [-], 516 | 384138445 | insertion element DNA-binding protein | |
13 | A1122_07365 | 1625143..1625886 [+], 744 | 384138446 | hypothetical protein | TssF |
14 | A1122_07370 | 1625850..1626938 [+], 1089 | 384138447 | hypothetical protein | TssG |
15 | A1122_07375 | 1627064..1628380 [+], 1317 | 384138448 | hypothetical protein | Fha |
16 | A1122_07380 | 1628380..1628925 [+], 546 | 384138449 | putative lipoprotein | TssJ |
17 | A1122_07385 | 1628928..1630274 [+], 1347 | 384138450 | hypothetical protein | TssK |
18 | A1122_07390 | 1630274..1631041 [+], 768 | 384138451 | putative membrane protein Aec26 | TssL |
19 | A1122_07395 | 1631052..1633655 [+], 2604 | 384138452 | Clp ATPase | TssH |
20 | A1122_07400 | 1633652..1634449 [+], 798 | 384138453 | hypothetical protein | |
21 | A1122_07405 | 1634446..1635132 [+], 687 | 384138454 | hypothetical protein | |
22 | A1122_07410 | 1635138..1636526 [+], 1389 | 384138455 | hypothetical protein | TssA |
23 | A1122_07415 | 1636558..1640091 [+], 3534 | 384138456 | hypothetical protein | TssM |
24 | A1122_07420 | 1640216..1640998 [+], 783 | 384138457 | hypothetical protein | TssA |
25 | A1122_07425 | 1641352..1641528 [+], 177 | 384138458 | hypothetical protein | |
26 | A1122_07430 | 1641550..1643952 [+], 2403 | 384138459 | putative Rhs accessory genetic element | TssI |
27 | A1122_07435 | 1643958..1644416 [+], 459 | 384138460 | hypothetical protein | |
28 | A1122_07440 | 1644409..1647273 [+], 2865 | 384138461 | hypothetical protein | PAAR |
29 | A1122_07445 | 1647301..1648671 [+], 1371 | 384138462 | hypothetical protein | |
30 | A1122_07450 | 1648673..1649158 [+], 486 | 384138463 | hypothetical protein | |
31 | A1122_07455 | 1649208..1649399 [-], 192 | 384138464 | hypothetical protein | |
32 | A1122_07460 | 1649475..1649699 [-], 225 | 384138465 | hypothetical protein | |
33 | A1122_07465 | 1649781..1650188 [-], 408 | 384138466 | putative transcriptional regulator | |
34 | A1122_07470 | 1650351..1650527 [+], 177 | 384138467 | hypothetical protein | |
35 | A1122_07475 | 1650549..1652747 [+], 2199 | 384138468 | putative Rhs accessory genetic element | TssI |
36 | A1122_07480 | 1652750..1653172 [+], 423 | 384138469 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein