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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | A1122_18455 | 3965149..3965802 [-], 654 | 384140626 | hypothetical protein | |
2 | A1122_18460 | 3966030..3967625 [-], 1596 | 384140627 | ABC transporter ATP-binding protein | |
3 | A1122_18465 | 3968308..3968931 [+], 624 | 384140628 | hypothetical protein | |
4 | A1122_18470 | 3969143..3970510 [-], 1368 | 384140629 | hypothetical protein | TssA |
5 | A1122_18475 | 3970535..3970987 [-], 453 | 384140630 | hypothetical protein | TssE |
6 | A1122_18480 | 3970987..3971568 [-], 582 | 384140631 | hypothetical protein | TssJ |
7 | A1122_18485 | 3971543..3972628 [-], 1086 | 384140632 | hypothetical protein | TssG |
8 | A1122_18490 | 3972592..3974355 [-], 1764 | 384140633 | type VI secretion protein | TssF |
9 | A1122_18495 | 3974576..3975046 [-], 471 | 384140634 | hypothetical protein | |
10 | A1122_18500 | 3975046..3976104 [-], 1059 | 384140635 | hypothetical protein | PAAR |
11 | A1122_18505 | 3976122..3977723 [-], 1602 | 384140636 | hypothetical protein | TssA |
12 | A1122_18510 | 3977767..3981189 [-], 3423 | 384140637 | hypothetical protein | TssM |
13 | A1122_18515 | 3981186..3982418 [-], 1233 | 384140638 | hypothetical protein | |
14 | A1122_18520 | 3983139..3983258 [-], 120 | 384140639 | hypothetical protein | |
15 | A1122_18525 | 3983530..3983850 [+], 321 | 384140640 | transposase | |
16 | A1122_18530 | 3984364..3984531 [-], 168 | 384140641 | hypothetical protein | |
17 | A1122_18535 | 3984583..3985053 [-], 471 | 384140642 | hypothetical protein | |
18 | A1122_18540 | 3985130..3985231 [+], 102 | 384140643 | hypothetical protein | |
19 | A1122_18545 | 3985226..3987409 [-], 2184 | 384140644 | hypothetical protein | |
20 | A1122_18550 | 3987425..3987685 [-], 261 | 384140645 | hypothetical protein | |
21 | A1122_18555 | 3987839..3988612 [-], 774 | 384140646 | hypothetical protein | |
22 | A1122_18560 | 3988609..3990909 [-], 2301 | 384140647 | hypothetical protein | |
23 | A1122_18565 | 3990925..3993273 [-], 2349 | 384140648 | hypothetical protein | TssI |
24 | A1122_18570 | 3993276..3995918 [-], 2643 | 384140649 | putative ATPase subunit of ATP-dependent protease | TssH |
25 | A1122_18575 | 3996306..3996797 [-], 492 | 384140650 | hypothetical protein | TssD |
26 | A1122_18580 | 3996801..3998537 [-], 1737 | 384140651 | hypothetical protein | TagL |
27 | A1122_18585 | 3998537..3999223 [-], 687 | 384140652 | hypothetical protein | TssL |
28 | A1122_18590 | 3999220..4000572 [-], 1353 | 384140653 | hypothetical protein | TssK |
29 | A1122_18595 | 4000584..4002128 [-], 1545 | 384140654 | hypothetical protein | TssC |
30 | A1122_18600 | 4002177..4002677 [-], 501 | 384140655 | hypothetical protein | TssB |
31 | A1122_18605 | 4003666..4004514 [-], 849 | 384140656 | putative acyl transferase | |
32 | A1122_18610 | 4004613..4004861 [-], 249 | 384140657 | putative acyl carrier protein | |
33 | A1122_18615 | 4004899..4005387 [-], 489 | 384140658 | hypothetical protein | |
34 | A1122_18620 | 4005426..4006214 [-], 789 | 384140659 | putative short chain dehydrogenase | |
35 | A1122_18625 | 4006217..4006969 [-], 753 | 384140660 | polyketide biosynthesis enoyl-CoA hydratase | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein