SecReT6
I. Summary
SecReT6 ID585 insolico
StrainAcinetobacter baumannii MDR-ZJ06
Repliconchromosome [Browse all T6SS(s) in this replicon]
AccessionNC_017171
Location1508063..1527474
Comment
FunctionN/A
T6SS TypeType i; subtype i4b
insolico Bioinformatics investigation has been performed on this T6SS.

II. T6SS components
ComponentTssHTssDTssLTssITssATssBTssCTssETssF
Number111011111
ComponentTssGTssJTssKTssM
Number1011
III. genome coordinates of the T6SS gene cluster
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductNote
1ABZJ_RS071101503798..1504115 [+], 318446929261hypothetical protein 
2ABZJ_RS071151504161..1504517 [+], 357446721360hypothetical protein 
3ABZJ_RS071201504571..1504840 [+], 270446090878hypothetical protein 
4ABZJ_RS071251505152..1505862 [+], 711446659047heteromeric transposase endonuclease subunit TnsA 
5ABZJ_RS071301505863..1507773 [+], 1911446495212DDE-type integrase/transposase/recombinase 
6ABZJ_RS071351507778..1507903 [+], 126pseudogenetransposase 
7ABZJ_RS071451508195..1509285 [-], 10911194605199IS4 family transposase ISAba1 
8ABZJ_RS07150 (sul2)1509378..1510193 [+], 816446966004sulfonamide-resistant dihydropteroate synthase Sul2 
9ABZJ_RS071551510280..1510522 [+], 243pseudogenephosphoglucosamine mutase 
10ABZJ_RS071601510476..1510769 [-], 2941101993560hypothetical protein 
11ABZJ_RS071651510974..1511684 [+], 711446659050heteromeric transposase endonuclease subunit TnsA 
12ABZJ_RS071701511685..1513595 [+], 1911446495206DDE-type integrase/transposase/recombinase 
13ABZJ_RS071751513600..1514520 [+], 921446339230TniB family NTP-binding protein 
14ABZJ_RS071801514550..1515665 [+], 1116446003980TniQ family protein 
15ABZJ_RS071851515658..1517088 [+], 1431487943748hypothetical protein 
16ABZJ_RS071901517463..1517834 [-], 372446451517hypothetical protein 
17ABZJ_RS071951517907..1518206 [-], 300447017750hypothetical protein 
18ABZJ_RS072001518274..1519125 [-], 852445956709universal stress protein 
19ABZJ_RS072051519138..1520625 [-], 1488446876066SulP family inorganic anion transporter 
20ABZJ_RS072101520920..1522716 [-], 1797447067708hypothetical protein 
21ABZJ_RS07215 (tet(B))1522799..1524016 [-], 1218447011817tetracycline efflux MFS transporter Tet(B) 
22ABZJ_RS07220 (tetR(B))1524098..1524721 [+], 624446010750tetracycline resistance transcriptional repressor TetR(B) 
23ABZJ_RS072251524699..1525103 [-], 405446435122hypothetical protein 
24ABZJ_RS197651525107..1525310 [-], 204pseudogenehypothetical protein 
25ABZJ_RS072351525341..1526834 [-], 1494447043632IS91-like element ISVsa3 family transposase 
26ABZJ_RS072401527045..1527269 [-], 225446665867hypothetical protein 
27ABZJ_RS072451527389..1528225 [-], 837446403113aminoglycoside O-phosphotransferase APH(6)-Id 
28ABZJ_RS07250 (aph(3'')-Ib)1528225..1529028 [-], 804447005063aminoglycoside O-phosphotransferase APH(3'')-Ib 
29ABZJ_RS072551529411..1531198 [-], 1788447067715hypothetical protein 
30ABZJ_RS072601531281..1532138 [-], 858445932610ATP-binding protein 
31ABZJ_RS072651532204..1532431 [-], 228446817244accessory factor UbiK family protein 
 
flank Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

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Proteins        Genes

V. Investigation of the genomic context of the T6SS gene cluster.
1. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the mobile genetic elements database, ACLAME.
 






2. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the virulence factor database, VFDB.
 






3. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against against the antibiotic resistance database, ARDB.
 







Homology Effector list
A1S_1296

Effector identified
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProduct  Homolog

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Proteins        Genes
N/A
N/A