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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | XOC_2524 | 2562905..2563231 [-], 327 | 384419450 | hypothetical protein | |
2 | XOC_2525 | 2563228..2566131 [-], 2904 | 384419451 | protein kinase | |
3 | XOC_2526 | 2566128..2566850 [-], 723 | 384419452 | phosphoprotein phosphatase | |
4 | XOC_2527 | 2566847..2567485 [-], 639 | 384419453 | hypothetical protein | |
5 | XOC_2528 | 2567491..2570949 [-], 3459 | 384419454 | ImcF-related family | TssM |
6 | XOC_2529 | 2570953..2572269 [-], 1317 | 384419455 | OmpA family membrane protein | TssL |
7 | XOC_2530 | 2572271..2573608 [-], 1338 | 384419456 | protein ImpJ | TssK |
8 | XOC_2531 | 2573605..2575002 [-], 1398 | 384419457 | FHA domain-containing protein | Fha |
9 | XOC_2532 | 2575008..2575547 [-], 540 | 384419458 | hypothetical protein | |
10 | XOC_2533 | 2575556..2577634 [-], 2079 | 384419459 | Rhs-family protein | TssI |
11 | XOC_2534 | 2577757..2578035 [-], 279 | 384419460 | hypothetical protein | |
12 | XOC_2535 | 2578289..2578546 [-], 258 | 384419461 | transposase | |
13 | XOC_2536 | 2579277..2580293 [-], 1017 | 384419462 | transposase | |
14 | XOC_2537 | 2580934..2583639 [-], 2706 | 384419463 | chaperone ClpB | TssH |
15 | XOC_2538 | 2583672..2584682 [-], 1011 | 384419464 | hypothetical protein | TssG |
16 | XOC_2539 | 2584646..2586523 [-], 1878 | 384419465 | SciC protein | TssF |
17 | XOC_2540 | 2586527..2587030 [-], 504 | 384419466 | hypothetical protein | TssE |
18 | XOC_2541 | 2587018..2587851 [-], 834 | 384419467 | ImpE protein | TagJ |
19 | XOC_2542 | 2587887..2588390 [-], 504 | 384419468 | hypothetical protein | TssD |
20 | XOC_2543 | 2588490..2589992 [-], 1503 | 384419469 | SciI protein | TssC |
21 | XOC_2544 | 2589997..2590632 [-], 636 | 384419470 | hypothetical protein | TssB |
22 | XOC_2545 | 2591104..2593866 [+], 2763 | 384419471 | Rhs element Vgr protein | TssI |
23 | XOC_2546 | 2593868..2594713 [+], 846 | 384419472 | hypothetical protein | |
24 | XOC_2547 | 2594753..2597599 [+], 2847 | 384419473 | hypothetical protein | |
25 | XOC_2548 | 2597705..2598631 [+], 927 | 384419474 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein