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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | KN400_0390 (fliN) | 418401..418706 [+], 306 | 409910972 | flagellar motor switch protein FliN | |
2 | KN400_0391 (fliO) | 418703..419200 [+], 498 | 409910973 | flagellar biogenesis protein FliO | |
3 | KN400_0392 (fliP) | 419206..419973 [+], 768 | 409910974 | flagellar biogenesis protein FliP | |
4 | KN400_0393 (fliQ) | 419986..420255 [+], 270 | 409910975 | flagellar biogenesis protein FliQ | |
5 | KN400_0394 (fliR) | 420306..421100 [+], 795 | 409910976 | flagellar biogenesis protein FliR | |
6 | KN400_0395 (flhB) | 421105..422163 [+], 1059 | 409910977 | flagellar biogenesis protein FlhB | |
7 | KN400_0396 | 422222..422692 [-], 471 | 409910978 | SH3 domain lipoprotein | |
8 | KN400_0397 (tssJ) | 422979..423533 [+], 555 | 409910979 | type VI secretion system outer membrane lipoprotein TssJ | TssJ |
9 | KN400_0398 (tssK) | 423530..424921 [+], 1392 | 409910980 | type VI secretion system protein TssK | TssK |
10 | KN400_0399 (tssE) | 424925..425332 [+], 408 | 409910981 | type VI secretion system needle hub protein TssE | TssE |
11 | KN400_0400 (tssF) | 425361..427094 [+], 1734 | 409910982 | type VI secretion system protein TssF | TssF |
12 | KN400_0401 (tssG) | 427058..428050 [+], 993 | 409910983 | type VI secretion system protein TssG | TssG |
13 | KN400_0402 (tssH) | 428063..430690 [+], 2628 | 409910984 | type VI secretion system ATPase TssH, putative chaperone | TssH |
14 | KN400_0403 | 430700..431704 [-], 1005 | 409910985 | thiamin biosynthesis protein ThiI-related adenine nucleotide alpha hydrolase superfamily protein | |
15 | KN400_0404 | 431878..433527 [+], 1650 | 409910986 | PilB/PulE/GspE family ATPase | |
16 | KN400_0405 (pilT-3) | 433541..434611 [+], 1071 | 409910987 | twitching motility pilus retraction protein | |
17 | KN400_0406 | 434641..435075 [-], 435 | 409910988 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein