 |
| III. genome coordinates of the T6SS gene cluster |
| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
| 1 | KN400_3096 (cysM) | 3359178..3360104 [-], 927 | 409913601 | cysteine synthase B | |
| 2 | KN400_3098 | 3360218..3360808 [+], 591 | 409913602 | NUDIX hydrolase, coenzyme A pyrophosphatase family | |
| 3 | KN400_3099 (truC) | 3360814..3361566 [+], 753 | 409913603 | tRNA pseudouridine 65 synthase | |
| 4 | KN400_3100 (msrA) | 3361651..3362139 [+], 489 | 409913604 | peptide methionine sulfoxide reductase, S-isomer-specific | |
| 5 | KN400_3101 (ltaA) | 3362235..3363281 [+], 1047 | 409913605 | L-allo-threonine aldolase, stereospecific | |
| 6 | KN400_3103 | 3363278..3363646 [+], 369 | 409913606 | glutaredoxin-like protein, selenocysteine-containing | |
| 7 | KN400_3104 (tssL) | 3363993..3364676 [+], 684 | 409913607 | type VI secretion system inner membrane protein TssL | TssL |
| 8 | KN400_3105 (tssM) | 3364678..3368142 [+], 3465 | 409913608 | type VI secretion system ATPase and inner membrane protein TssM | TssM |
| 9 | KN400_3106 | 3368189..3370558 [+], 2370 | 409913609 | type VI secretion system protein | TssA |
| 10 | KN400_3107 | 3370565..3371758 [+], 1194 | 409913610 | hypothetical protein | |
11 | KN400_3108 | 3371758..3372426 [+], 669 | 409913611 | hypothetical protein | PAAR |
| 12 | KN400_3109 | 3372423..3373451 [+], 1029 | 409913612 | lipoprotein | |
| 13 | KN400_3110 | 3373467..3375083 [+], 1617 | 409913613 | hypothetical protein | |
| 14 | KN400_3111 (tssB) | 3375185..3375670 [+], 486 | 409913614 | type VI secretion system needle sheath protein TssB | TssB |
| 15 | KN400_3112 (tssC) | 3375681..3377165 [+], 1485 | 409913615 | type VI secretion system needle sheath protein TssC | TssC |
| 16 | KN400_3113 (tssD) | 3377247..3377732 [+], 486 | 409913616 | type VI secretion system needle tube protein TssD | TssD |
| 17 | KN400_3519 | 3377851..3378306 [+], 456 | 409913617 | hypothetical protein | |
| 18 | KN400_3520 | 3378361..3379278 [+], 918 | 409913618 | LysM domain-containing protein | |
| 19 | KN400_3114 (tssI) | 3379335..3381428 [+], 2094 | 409913619 | type VI secretion system needle syringe protein TssI | TssI |
| 20 | KN400_3115 | 3381460..3381960 [+], 501 | 409913620 | hypothetical protein | |
| 21 | KN400_3116 | 3381981..3383234 [+], 1254 | 409913621 | hypothetical protein | |
| 22 | KN400_3117 | 3383231..3384274 [+], 1044 | 409913622 | hypothetical protein | |
23 | KN400_3118 | 3384294..3384674 [+], 381 | 409913623 | hypothetical protein | PAAR |
| 24 | KN400_3119 | 3384726..3385103 [+], 378 | 409913624 | hypothetical protein | |
| |
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein
SecReT6 ID
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein