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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | PAM18_2664 | 2964035..2965309 [-], 1275 | 386058727 | putative ABC-type transport protein, periplasmic component | |
2 | PAM18_2665 | 2965441..2966082 [-], 642 | 386058728 | putative transcriptional regulator | |
3 | PAM18_2666 | 2966359..2966754 [+], 396 | 386058729 | hypothetical protein | |
4 | PAM18_2667 | 2966777..2967313 [-], 537 | 386058730 | hypothetical protein | |
5 | PAM18_2668 | 2967324..2969330 [-], 2007 | 386058731 | hypothetical protein | TssI |
6 | PAM18_2669 | 2969678..2970250 [-], 573 | 386058732 | hypothetical protein | |
7 | PAM18_2670 | 2970272..2972821 [-], 2550 | 386058733 | putative ClpA/B-type protease | TssH |
8 | PAM18_2671 | 2972823..2973839 [-], 1017 | 386058734 | hypothetical protein | TssG |
9 | PAM18_2672 | 2973803..2975596 [-], 1794 | 386058735 | hypothetical protein | TssF |
10 | PAM18_2673 | 2975580..2976005 [-], 426 | 386058736 | hypothetical protein | TssE |
11 | PAM18_2674 | 2976018..2976515 [-], 498 | 386058737 | hypothetical protein | TssD |
12 | PAM18_2675 | 2976589..2978073 [-], 1485 | 386058738 | hypothetical protein | TssC |
13 | PAM18_2676 | 2978096..2978641 [-], 546 | 386058739 | hypothetical protein | TssB |
14 | PAM18_2677 | 2978850..2979326 [+], 477 | 386058740 | hypothetical protein | |
15 | PAM18_2678 | 2979386..2980717 [+], 1332 | 386058741 | hypothetical protein | TssK |
16 | PAM18_2679 | 2980735..2981493 [+], 759 | 386058742 | hypothetical protein | TssL |
17 | PAM18_2680 | 2981490..2985305 [+], 3816 | 386058743 | hypothetical protein | TssM |
18 | PAM18_2681 | 2985302..2986402 [+], 1101 | 386058744 | hypothetical protein | TssA |
19 | PAM18_2682 | 2986512..2987597 [+], 1086 | 386058745 | putative transcriptional regulator | Sfa3 |
20 | PAM18_2683 | 2987833..2988099 [+], 267 | 386058746 | hypothetical protein | |
21 | PAM18_2684 (msuE) | 2988259..2988819 [+], 561 | 386058747 | NADH-dependent FMN reductase MsuE | |
22 | PAM18_2685 (msuD) | 2988829..2989974 [+], 1146 | 386058748 | methanesulfonate sulfonatase MsuD | |
23 | PAM18_2686 | 2990004..2991188 [+], 1185 | 386058749 | putative FMNH2-dependent monooxygenase | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein