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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | PAM18_3371 | 3752833..3753153 [+], 321 | 386059434 | hypothetical protein | |
2 | PAM18_3372 | 3753210..3753767 [+], 558 | 386059435 | hypothetical protein | |
3 | PAM18_3373 (folE) | 3753845..3754390 [+], 546 | 386059436 | GTP cyclohydrolase I | |
4 | PAM18_3374 | 3754455..3754916 [-], 462 | 386059437 | hypothetical protein | |
5 | PAM18_3375 | 3755162..3755542 [+], 381 | 386059438 | hypothetical protein | |
6 | PAM18_3376 (stk1) | 3755570..3756559 [-], 990 | 386059439 | serine-threonine kinase Stk1 | Stk1 |
7 | PAM18_3377 (stp1) | 3756556..3757284 [-], 729 | 386059440 | serine/threonine phosphoprotein phosphatase Stp1 | Stp1 |
8 | PAM18_3378 | 3757284..3760811 [-], 3528 | 386059441 | hypothetical protein | TssM |
9 | PAM18_3379 | 3760827..3761696 [-], 870 | 386059442 | putative outer membrane protein | TssL |
10 | PAM18_3380 | 3761699..3763030 [-], 1332 | 386059443 | hypothetical protein | TssK |
11 | PAM18_3381 | 3763027..3763542 [-], 516 | 386059444 | putative lipoprotein | TssJ |
12 | PAM18_3382 | 3763539..3764732 [-], 1194 | 386059445 | hypothetical protein | Fha |
13 | PAM18_3383 | 3764979..3766490 [-], 1512 | 386059446 | putative transcriptional regulator | Sfa2 |
14 | PAM18_3384 | 3766501..3769128 [-], 2628 | 386059447 | putative ClpA/B-type protease | TssH |
15 | PAM18_3385 | 3769141..3770148 [-], 1008 | 386059448 | hypothetical protein | TssG |
16 | PAM18_3386 | 3770112..3771899 [-], 1788 | 386059449 | hypothetical protein | TssF |
17 | PAM18_3387 | 3772237..3772644 [-], 408 | 386059450 | hypothetical protein | TssE |
18 | PAM18_3388 | 3772657..3774132 [-], 1476 | 386059451 | hypothetical protein | TssC |
19 | PAM18_3389 | 3774161..3774667 [-], 507 | 386059452 | hypothetical protein | TssB |
20 | PAM18_3390 | 3774703..3776259 [-], 1557 | 386059453 | hypothetical protein | TssA |
21 | PAM18_3391 | 3777431..3778033 [-], 603 | 386059454 | putative glutathione S-transferase | |
22 | PAM18_3392 | 3778089..3779255 [-], 1167 | 386059455 | putative aminotransferase | |
23 | PAM18_3393 | 3779337..3779813 [+], 477 | 386059456 | putative transcriptional regulator | |
24 | PAM18_3394 | 3779863..3780498 [-], 636 | 386059457 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein