 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | NCGM2_2550 | 2728078..2731440 [-], 3363 | 386065489 | putative Rhs family protein | RhsP2 (e) |
2 | NCGM2_2551 | 2731437..2731841 [-], 405 | 386065490 | hypothetical protein | |
3 | NCGM2_2552 | 2732174..2734210 [-], 2037 | 386065491 | hypothetical protein | TssI |
4 | NCGM2_2553 (hcpD) | 2734406..2734924 [-], 519 | 386065492 | secreted protein | TssD |
5 | NCGM2_2554 | 2735622..2737178 [+], 1557 | 386065493 | hypothetical protein | TssA |
6 | NCGM2_2555 | 2737214..2737720 [+], 507 | 386065494 | hypothetical protein | TssB |
7 | NCGM2_2556 | 2737748..2739223 [+], 1476 | 386065495 | hypothetical protein | TssC |
8 | NCGM2_2557 | 2739236..2739643 [+], 408 | 386065496 | hypothetical protein | TssE |
9 | NCGM2_2558 | 2739975..2741762 [+], 1788 | 386065497 | hypothetical protein | TssF |
10 | NCGM2_2559 | 2741726..2742733 [+], 1008 | 386065498 | hypothetical protein | TssG |
11 | NCGM2_2560 | 2742746..2745373 [+], 2628 | 386065499 | putative ClpA/B-type protease | TssH |
12 | NCGM2_2561 | 2745384..2746895 [+], 1512 | 386065500 | putative transcriptional regulator | Sfa2 |
13 | NCGM2_2562 | 2746984..2747124 [+], 141 | 386065501 | hypothetical protein | |
14 | NCGM2_2563 | 2747142..2748335 [+], 1194 | 386065502 | hypothetical protein | Fha |
15 | NCGM2_2564 | 2748332..2748847 [+], 516 | 386065503 | putative lipoprotein | TssJ |
16 | NCGM2_2565 | 2748844..2750175 [+], 1332 | 386065504 | hypothetical protein | TssK |
17 | NCGM2_2566 | 2750178..2751047 [+], 870 | 386065505 | hypothetical protein | TssL |
18 | NCGM2_2567 | 2751063..2754590 [+], 3528 | 386065506 | hypothetical protein | TssM |
19 | NCGM2_2568 (stp1) | 2754590..2755318 [+], 729 | 386065507 | serine/threonine phosphoprotein phosphatase | Stp1 |
20 | NCGM2_2569 (stk1) | 2755315..2756304 [+], 990 | 386065508 | serine-threonine kinase | Stk1 |
21 | NCGM2_2570 | 2756332..2756661 [-], 330 | 386065509 | hypothetical protein | |
22 | NCGM2_2571 | 2756958..2757419 [+], 462 | 386065510 | hypothetical protein | |
23 | NCGM2_2572 (folE) | 2757484..2758029 [-], 546 | 386065511 | GTP cyclohydrolase I | |
24 | NCGM2_2573 | 2758107..2758664 [-], 558 | 386065512 | hypothetical protein | |
25 | NCGM2_2574 | 2758721..2759041 [-], 321 | 386065513 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein