 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | NCGM2_3364 (msuC) | 3600633..3601817 [-], 1185 | 386066293 | putative FMNH2-dependent monooxygenase | |
2 | NCGM2_3365 (msuD) | 3601847..3602992 [-], 1146 | 386066294 | methanesulfonate sulfonatase | |
3 | NCGM2_3366 (msuE) | 3603002..3603562 [-], 561 | 386066295 | NADH-dependent FMN reductase | |
4 | NCGM2_3367 | 3603722..3603988 [-], 267 | 386066296 | hypothetical protein | |
5 | NCGM2_3368 | 3603965..3604213 [+], 249 | 386066297 | hypothetical protein | |
6 | NCGM2_3369 (sfnR) | 3604224..3605309 [-], 1086 | 386066298 | putative transcriptional regulator | Sfa3 |
7 | NCGM2_3370 | 3605419..3606519 [-], 1101 | 386066299 | hypothetical protein | TssA |
8 | NCGM2_3371 | 3606516..3610331 [-], 3816 | 386066300 | hypothetical protein | TssM |
9 | NCGM2_3372 | 3610328..3611086 [-], 759 | 386066301 | hypothetical protein | TssL |
10 | NCGM2_3373 | 3611104..3612396 [-], 1293 | 386066302 | hypothetical protein | TssK |
11 | NCGM2_3374 | 3612495..3612971 [-], 477 | 386066303 | hypothetical protein | |
12 | NCGM2_3375 | 3613179..3613724 [+], 546 | 386066304 | hypothetical protein | TssB |
13 | NCGM2_3376 | 3613747..3615231 [+], 1485 | 386066305 | hypothetical protein | TssC |
14 | NCGM2_3377 | 3615305..3615802 [+], 498 | 386066306 | hypothetical protein | TssD |
15 | NCGM2_3378 | 3615815..3616240 [+], 426 | 386066307 | hypothetical protein | TssE |
16 | NCGM2_3379 | 3616224..3618017 [+], 1794 | 386066308 | hypothetical protein | TssF |
17 | NCGM2_3380 | 3617981..3618997 [+], 1017 | 386066309 | hypothetical protein | TssG |
18 | NCGM2_3381 | 3618999..3621548 [+], 2550 | 386066310 | putative ClpA/B-type protease | TssH |
19 | NCGM2_3382 | 3621622..3622155 [+], 534 | 386066311 | hypothetical protein | |
20 | NCGM2_3383 | 3622263..3623261 [+], 999 | 386066312 | hypothetical protein | |
21 | NCGM2_3384 | 3623298..3625304 [+], 2007 | 386066313 | hypothetical protein | TssI |
22 | NCGM2_3385 | 3625315..3625851 [+], 537 | 386066314 | hypothetical protein | |
23 | NCGM2_3386 | 3625874..3626269 [-], 396 | 386066315 | hypothetical protein | |
24 | NCGM2_3387 | 3626546..3627187 [+], 642 | 386066316 | putative transcriptional regulator | |
25 | NCGM2_3388 | 3627388..3628593 [+], 1206 | 386066317 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein