 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | PAGR_g1653 | 1813311..1814765 [-], 1455 | 386078871 | AMP nucleosidase Amn | |
2 | PAGR_g1654 | 1815157..1816575 [+], 1419 | 386078872 | MATE efflux family protein YeeO | |
3 | PAGR_g1655 | 1817685..1818284 [+], 600 | 386078873 | type VI secretion system-associated protein | |
4 | PAGR_g1656 | 1818308..1818811 [+], 504 | 386078874 | type VI secretion system protein VasD | TssJ |
5 | PAGR_g1657 | 1818833..1820173 [+], 1341 | 386078875 | type VI secretion system protein ImpJ | TssK |
6 | PAGR_g1658 | 1820190..1821431 [+], 1242 | 386078876 | type VI secretion system protein ImpK | TssL |
7 | PAGR_g1659 | 1821435..1825061 [+], 3627 | 386078877 | type VI secretion system protein IcmF | TssM |
8 | PAGR_g1660 | 1825076..1825789 [+], 714 | 386078878 | type VI secretion system protein ImpM | |
9 | PAGR_g1661 | 1825800..1826822 [+], 1023 | 386078879 | type VI secretion system protein ImpA | TssA |
10 | PAGR_g1662 | 1826903..1827433 [+], 531 | 386078880 | type VI secretion system protein ImpB | TssB |
11 | PAGR_g1663 | 1827433..1828932 [+], 1500 | 386078881 | type VI secretion system protein ImpC | TssC |
12 | PAGR_g1664 | 1829513..1829995 [+], 483 | 386078882 | type VI secretion system effector protein hcp | TssD |
13 | PAGR_g1665 | 1830064..1830894 [+], 831 | 386078883 | hypothetical protein | |
14 | PAGR_g1666 | 1830891..1831706 [+], 816 | 386078884 | hypothetical protein | |
15 | PAGR_g1667 | 1832272..1834167 [+], 1896 | 386078885 | FHA domain-containing protein | Fha |
16 | PAGR_g1668 | 1834164..1834955 [+], 792 | 386078886 | protein serine/threonine phosphatase PppA | |
17 | PAGR_g1669 | 1834966..1835964 [+], 999 | 386078887 | putative type VI secretion system-associated protein | |
18 | PAGR_g1670 | 1835981..1836808 [+], 828 | 386078888 | putative type VI secretion system-associated protein | TagJ |
19 | PAGR_g1671 | 1836798..1837373 [+], 576 | 386078889 | type VI secretion system lysozyme-like protein | TssE |
20 | PAGR_g1672 | 1837376..1839253 [+], 1878 | 386078890 | type VI secretion system protein ImpG | TssF |
21 | PAGR_g1673 | 1839250..1840299 [+], 1050 | 386078891 | type VI secretion system protein ImpH | TssG |
22 | PAGR_g1674 | 1840353..1842962 [+], 2610 | 386078892 | type VI secretion system protein VasG | TssH |
23 | PAGR_g1675 | 1842992..1844455 [+], 1464 | 386078893 | type VI secretion system, serine- threonine protein kinase | |
24 | PAGR_g1676 | 1844467..1846710 [+], 2244 | 386078894 | putative type VI secretion system effector protein VgrG | TssI |
25 | PAGR_g1677 | 1846720..1847100 [+], 381 | 386078895 | hypothetical protein | |
26 | PAGR_g1678 | 1847302..1847676 [+], 375 | 386078896 | hypothetical protein | |
27 | PAGR_g1679 | 1847771..1848157 [+], 387 | 386078897 | hypothetical protein | |
28 | PAGR_g1680 | 1848529..1851069 [+], 2541 | 386078898 | pentapeptide repeat-containing protein | |
29 | PAGR_g1681 | 1851066..1852136 [+], 1071 | 386078899 | pentapeptide repeat-containing protein | |
30 | PAGR_g1682 | 1852149..1852754 [+], 606 | 386078900 | hypothetical protein | |
31 | PAGR_g1683 | 1852764..1853156 [+], 393 | 386078901 | hypothetical protein | |
32 | PAGR_g1684 | 1853204..1855693 [+], 2490 | 386078902 | putative type VI secretion system effector protein VgrG | TssI |
33 | PAGR_g1685 | 1855690..1856070 [+], 381 | 386078903 | hypothetical protein | |
34 | PAGR_g1686 | 1856323..1857069 [+], 747 | 386078904 | hypothetical protein | |
35 | PAGR_g1687 | 1857080..1857928 [+], 849 | 386078905 | hypothetical protein | |
36 | PAGR_g1688 | 1857941..1858381 [+], 441 | 386078906 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein