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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | NRG857_01055 | 238304..239059 [-], 756 | 387615554 | hydroxyacylglutathione hydrolase | |
2 | NRG857_01060 | 239093..239815 [+], 723 | 387615555 | putative S-adenosyl-L-methionine-dependent methyltransferase | |
3 | NRG857_01065 (rnhA) | 239812..240279 [-], 468 | 387615556 | ribonuclease H | |
4 | NRG857_01070 | 240344..241075 [+], 732 | 387615557 | DNA polymerase III subunit epsilon | |
5 | NRG857_01075 | 241614..242399 [+], 786 | 387615558 | putative aminopeptidase | |
6 | NRG857_01080 | 242739..243218 [-], 480 | 387615559 | hypothetical protein | TssD |
7 | NRG857_01085 | 243236..244594 [-], 1359 | 387615560 | hypothetical protein | TssA |
8 | NRG857_01090 | 244605..248129 [-], 3525 | 387615561 | IcmF-like protein | TssM |
9 | NRG857_01095 | 248149..249591 [-], 1443 | 387615562 | hypothetical protein | TssA |
10 | NRG857_01100 | 249596..250339 [-], 744 | 387615563 | hypothetical protein | |
11 | NRG857_01105 | 250336..253098 [-], 2763 | 387615564 | putative ATP-dependent Clp proteinase Aec27 ATP-binding chain, with chaperone activity | TssH |
12 | NRG857_01110 | 253108..253872 [-], 765 | 387615565 | hypothetical protein | TssL |
13 | NRG857_01115 | 253877..255223 [-], 1347 | 387615566 | hypothetical protein | TssK |
14 | NRG857_01120 | 255226..255750 [-], 525 | 387615567 | hypothetical protein | TssJ |
15 | NRG857_01125 | 255747..257039 [-], 1293 | 387615568 | hypothetical protein | Fha |
16 | NRG857_01130 | 257044..258093 [-], 1050 | 387615569 | hypothetical protein | TssG |
17 | NRG857_01135 | 258057..259898 [-], 1842 | 387615570 | hypothetical protein | TssF |
18 | NRG857_01140 | 259904..260329 [-], 426 | 387615571 | hypothetical protein | TssE |
19 | NRG857_01145 | 260334..261818 [-], 1485 | 387615572 | hypothetical protein | TssC |
20 | NRG857_01150 | 261841..262344 [-], 504 | 387615573 | hypothetical protein | TssB |
21 | NRG857_01155 | 263050..263568 [+], 519 | 387615574 | hypothetical protein | TssD |
22 | NRG857_01160 | 263663..263773 [+], 111 | 387615575 | hypothetical protein | |
23 | NRG857_01165 | 263789..265771 [+], 1983 | 387615576 | Vgr-like protein | TssI |
24 | NRG857_01170 | 265878..266273 [+], 396 | 387615577 | hypothetical protein | |
25 | NRG857_01180 | 266918..268357 [+], 1440 | 387615578 | hypothetical protein | PAAR |
26 | NRG857_01185 | 268332..268622 [+], 291 | 387615579 | hypothetical protein | |
27 | NRG857_01190 | 268880..269059 [+], 180 | 387615580 | putative H-repeat associated protein | |
28 | NRG857_01195 | 269159..269644 [+], 486 | 387615581 | hypothetical protein | |
29 | NRG857_01200 | 269873..270376 [+], 504 | 387615582 | hypothetical protein | |
30 | NRG857_01205 | 270446..270958 [+], 513 | 387615583 | hypothetical protein | |
31 | NRG857_01210 | 271229..271999 [-], 771 | 387615584 | hypothetical protein | |
32 | NRG857_01215 | 272153..272626 [+], 474 | 387615585 | C-lysozyme inhibitor | |
33 | NRG857_01220 (fadE) | 272669..275113 [-], 2445 | 387615586 | acyl-CoA dehydrogenase | |
34 | NRG857_01225 (gmhA) | 275353..275931 [+], 579 | 387615587 | phosphoheptose isomerase | |
35 | NRG857_01230 | 276136..276903 [+], 768 | 387615588 | putative amidotransfease | |
36 | NRG857_01235 | 276874..277614 [-], 741 | 387615589 | hypothetical protein | |
37 | NRG857_01240 | 277917..278675 [+], 759 | 387615590 | putative exported hydrolase | |
38 | NRG857_01245 | 278851..279348 [+], 498 | 387615591 | hypothetical protein | |
39 | NRG857_01250 | 279766..281505 [-], 1740 | 387615592 | flagellar system protein | |
40 | NRG857_01255 | 281465..282235 [+], 771 | 387615593 | hypothetical protein | TagL |
41 | NRG857_01260 | 282306..283361 [+], 1056 | 387615594 | DNA polymerase IV | |
42 | NRG857_01265 | 283413..283706 [+], 294 | 387615595 | putative antitoxin of the YafO-YafN toxin-antitoxin system | |
43 | NRG857_01270 | 283709..284107 [+], 399 | 387615596 | putative toxin YafO | |
44 | NRG857_01275 | 284117..284569 [+], 453 | 387615597 | hypothetical protein | |
45 | NRG857_01280 | 284886..286025 [+], 1140 | 387615598 | hypothetical protein | |
46 | NRG857_01285 (prfH) | 286022..286636 [+], 615 | 387615599 | peptide chain release factor-like protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein