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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | ECW_m3021 (csdA) | 3096575..3097780 [+], 1206 | 386610174 | cysteine sulfinate desulfinase | |
2 | ECW_m3022 (csdE) | 3097780..3098223 [+], 444 | 386610175 | Fe-S metabolism protein | |
3 | ECW_m3023 (ygdL) | 3098274..3099080 [-], 807 | 386610176 | hypothetical protein | |
4 | ECW_m3024 (mltA) | 3099157..3100254 [-], 1098 | 386610177 | membrane-bound lytic murein transglycosylase A | |
5 | ECW_m3028 | 3101394..3101894 [+], 501 | 386610178 | hypothetical protein | TssB |
6 | ECW_m3029 | 3101953..3103491 [+], 1539 | 386610179 | hypothetical protein | TssC |
7 | ECW_m3030 | 3103509..3104846 [+], 1338 | 386610180 | hypothetical protein | TssK |
8 | ECW_m3031 | 3104843..3105508 [+], 666 | 386610181 | Type IV/VI secretion system protein, DotU family | TssL |
9 | ECW_m3032 | 3105521..3107173 [+], 1653 | 386610182 | Putative outer membrane protein/OmpA domain protein | TagL |
10 | ECW_m3033 | 3107231..3107722 [+], 492 | 386610183 | Secreted protein Hcp | TssD |
11 | ECW_m3034 | 3107913..3110558 [+], 2646 | 386610184 | ClpA/ClpB family protein | TssH |
12 | ECW_m3035 | 3110570..3113056 [+], 2487 | 386610185 | ImpA family type VI secretion-associated protein | TssI |
13 | ECW_m3036 | 3113058..3113909 [+], 852 | 386610186 | hypothetical protein | |
14 | ECW_m3037 | 3113899..3114435 [+], 537 | 386610187 | hypothetical protein | |
15 | ECW_m3039 | 3117469..3117891 [+], 423 | 386610188 | hypothetical protein | |
16 | ECW_m3040 | 3117893..3118444 [+], 552 | 386610189 | hypothetical protein | |
17 | ECW_m3041 | 3118522..3119736 [+], 1215 | 386610190 | hypothetical protein | |
18 | ECW_m3042 | 3119688..3123125 [+], 3438 | 386610191 | hypothetical protein | TssM |
19 | ECW_m3044 | 3124732..3125649 [+], 918 | 386610192 | Paar | PAAR |
20 | ECW_m3045 | 3126099..3126206 [+], 108 | 386610193 | hypothetical protein | |
21 | ECW_m3046 | 3126751..3128109 [+], 1359 | 386610194 | type VI secretion-associated protein, family | TssA |
22 | ECW_m3047 | 3128115..3128591 [+], 477 | 386610195 | hypothetical protein | PAAR |
23 | ECW_m3048 | 3128584..3129261 [-], 678 | 386610196 | IS911 transposase ORF2 | |
24 | ECW_m3050 | 3129450..3129761 [-], 312 | 386610197 | IS911 transposase ORF1 | |
25 | ECW_m3051 | 3129823..3130116 [+], 294 | 386610198 | hypothetical protein | |
26 | ECW_m3052 | 3130787..3131209 [+], 423 | 386610199 | hypothetical protein | |
27 | ECW_m3053 | 3131769..3133529 [+], 1761 | 386610200 | hypothetical protein | TssF |
28 | ECW_m3054 | 3133493..3134572 [+], 1080 | 386610201 | hypothetical protein | TssG |
29 | ECW_m3055 | 3134553..3135089 [+], 537 | 386610202 | type VI secretion lipoprotein | TssJ |
30 | ECW_m3056 | 3135093..3135521 [+], 429 | 386610203 | hypothetical protein | TssE |
31 | ECW_m3057 | 3135521..3136897 [+], 1377 | 386610204 | hypothetical protein | TssA |
32 | ECW_m3058 | 3136962..3137510 [+], 549 | 386610205 | hypothetical protein | |
33 | ECW_m3059 (amiC) | 3137856..3139109 [-], 1254 | 386610206 | N-acetylmuramoyl-L-alanine amidase | |
34 | ECW_m3060 (argA) | 3139341..3140672 [+], 1332 | 386610207 | fused acetylglutamate kinase-like protein (inactive)/amino acid N-acetyltransferase | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein