 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | i14_3103 | 3106703..3107944 [+], 1242 | 386635470 | cysteine sulfinate desulfinase | |
2 | i14_3104 (ygdK) | 3107944..3108387 [+], 444 | 386635471 | hypothetical protein | |
3 | i14_3105 (ygdL) | 3108438..3109244 [-], 807 | 386635472 | hypothetical protein | |
4 | i14_3106 (mltA) | 3109321..3110418 [-], 1098 | 386635473 | murein transglycosylase A | |
5 | i14_3107 | 3111538..3112059 [+], 522 | 386635474 | hypothetical protein | TssB |
6 | i14_3108 | 3112112..3113656 [+], 1545 | 386635475 | hypothetical protein | TssC |
7 | i14_3109 | 3113676..3115013 [+], 1338 | 386635476 | hypothetical protein | TssK |
8 | i14_3110 | 3115010..3115675 [+], 666 | 386635477 | hypothetical protein | TssL |
9 | i14_3111 | 3115688..3117340 [+], 1653 | 386635478 | hypothetical protein | TagL |
10 | i14_3112 | 3117398..3117889 [+], 492 | 386635479 | secreted protein Hcp | TssD |
11 | i14_3113 | 3118081..3120717 [+], 2637 | 386635480 | ClpB protein | TssH |
12 | i14_3114 | 3120717..3123191 [+], 2475 | 386635481 | hypothetical protein | TssI |
13 | i14_3115 | 3123206..3124030 [+], 825 | 386635482 | hypothetical protein | |
14 | i14_3116 | 3124027..3126003 [+], 1977 | 386635483 | hypothetical protein | |
15 | i14_3117 | 3126013..3126285 [+], 273 | 386635484 | hypothetical protein | PAAR |
16 | i14_3118 | 3126285..3127718 [+], 1434 | 386635485 | hypothetical protein | |
17 | i14_3119 | 3127890..3131063 [+], 3174 | 386635486 | hypothetical protein | TssM |
18 | i14_3120 | 3131029..3132666 [+], 1638 | 386635487 | hypothetical protein | TssA |
19 | i14_3121 | 3132700..3134460 [+], 1761 | 386635488 | hypothetical protein | TssF |
20 | i14_3122 | 3134424..3135503 [+], 1080 | 386635489 | hypothetical protein | TssG |
21 | i14_3123 | 3135484..3136020 [+], 537 | 386635490 | hypothetical protein | TssJ |
22 | i14_3124 | 3136024..3136452 [+], 429 | 386635491 | hypothetical protein | TssE |
23 | i14_3125 | 3136452..3137828 [+], 1377 | 386635492 | hypothetical protein | TssA |
24 | i14_3127 | 3138128..3139084 [-], 957 | 386635493 | 2-hydroxyacid dehydrogenase | |
25 | i14_3128 | 3139147..3139743 [-], 597 | 386635494 | phosphosugar isomerase | |
26 | i14_3129 | 3139746..3140921 [-], 1176 | 386635495 | Beta-cystathionase | |
27 | i14_3130 | 3140921..3142501 [-], 1581 | 386635496 | PTS system, maltose and glucose-specific IIABC | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein