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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | S70_09485 | 2029256..2029552 [-], 297 | 386743269 | hypothetical protein | PAAR |
2 | S70_09490 | 2029603..2030493 [-], 891 | 386743270 | hypothetical protein | |
3 | S70_09495 | 2030730..2030987 [-], 258 | 386743271 | hypothetical protein | PAAR |
4 | S70_09500 | 2031057..2031467 [-], 411 | 386743272 | hypothetical protein | |
5 | S70_09505 | 2031561..2033195 [-], 1635 | 386743273 | hypothetical protein | |
6 | S70_09510 | 2033192..2033998 [-], 807 | 386743274 | hypothetical protein | |
7 | S70_09515 | 2033995..2036142 [-], 2148 | 386743275 | VgrG-like protein | TssI |
8 | S70_09520 | 2036191..2037927 [-], 1737 | 386743276 | hypothetical protein | TssF |
9 | S70_09525 | 2037947..2038426 [-], 480 | 386743277 | Hcp-like protein | TssD |
10 | S70_09530 | 2038439..2039770 [-], 1332 | 386743278 | hypothetical protein | TssA |
11 | S70_09535 | 2039811..2042579 [-], 2769 | 386743279 | hypothetical protein | TssM |
12 | S70_09540 | 2042555..2043358 [-], 804 | 386743280 | hypothetical protein | TssM |
13 | S70_09545 | 2043355..2044818 [-], 1464 | 386743281 | hypothetical protein | TssA |
14 | S70_09550 | 2044824..2045468 [-], 645 | 386743282 | hypothetical protein | |
15 | S70_09555 | 2045465..2046262 [-], 798 | 386743283 | hypothetical protein | |
16 | S70_09560 | 2046259..2048874 [-], 2616 | 386743284 | ATPase | TssH |
17 | S70_09565 | 2048883..2049638 [-], 756 | 386743285 | putative membrane protein Aec26 | TssL |
18 | S70_09570 | 2049631..2050785 [-], 1155 | 386743286 | hypothetical protein | TssK |
19 | S70_09575 | 2050835..2050990 [-], 156 | 386743287 | hypothetical protein | TssK |
20 | S70_09580 | 2051042..2051545 [-], 504 | 386743288 | lipoprotein | TssJ |
21 | S70_09585 | 2051547..2052818 [-], 1272 | 386743289 | phosphopeptide-binding protein | Fha |
22 | S70_09590 | 2052824..2053861 [-], 1038 | 386743290 | hypothetical protein | TssG |
23 | S70_09595 | 2053825..2055606 [-], 1782 | 386743291 | hypothetical protein | TssF |
24 | S70_09600 | 2055608..2056045 [-], 438 | 386743292 | hypothetical protein | TssE |
25 | S70_09605 | 2056050..2057528 [-], 1479 | 386743293 | hypothetical protein | TssC |
26 | S70_09610 | 2057549..2058046 [-], 498 | 386743294 | hypothetical protein | TssB |
27 | S70_09615 | 2059186..2061495 [-], 2310 | 386743295 | glucan 1,4-alpha-glucosidase | |
28 | S70_09620 | 2061492..2062934 [-], 1443 | 386743296 | glucose-6-phosphate 1-dehydrogenase | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein