I. Summary
Component | TssH | TssD | TssL | TssI | TssA | TssB | TssC | TssE | TssF |
Number | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 |
Component | TssG | TssJ | TssK | TssM |
Number | 1 | 1 | 1 | 1 |
 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | BP1026B_II0568 | 702611..703300 [-], 690 | 386864282 | CDP-alcohol phosphatidyltransferase | |
2 | BP1026B_II0569 | 703665..705179 [+], 1515 | 386864283 | acetyl-CoA hydrolase/transferase | |
3 | BP1026B_II0571 | 706647..706784 [-], 138 | 386864284 | hypothetical protein | |
4 | BP1026B_II0572 (tssA-4) | 706900..707838 [+], 939 | 386864285 | type VI secretion system | TssA |
5 | BP1026B_II0573 (tssB-4) | 707872..708420 [+], 549 | 386864286 | type VI secretion system | TssB |
6 | BP1026B_II0574 (tssC-4) | 708417..709928 [+], 1512 | 386864287 | type VI secretion system | TssC |
7 | BP1026B_II0575 (hcp-4) | 710072..710599 [+], 528 | 386864288 | type VI secretion system | TssD |
8 | BP1026B_II0576 (tssE-4) | 710679..711110 [+], 432 | 386864289 | type VI secretion system | TssE |
9 | BP1026B_II0577 (tssF-4) | 711124..712986 [+], 1863 | 386864290 | type VI secretion system | TssF |
10 | BP1026B_II0578 (tssG-4) | 712983..713972 [+], 990 | 386864291 | type VI secretion system | TssG |
11 | BP1026B_II0579 (clpV-4) | 713975..716845 [+], 2871 | 386864292 | type VI secretion system | TssH |
12 | BP1026B_II0580 (vgrG-4a) | 716836..719124 [+], 2289 | 386864293 | type VI secretion system | TssI |
13 | BP1026B_II0581 (vgrG-4b) | 719290..721578 [+], 2289 | 386864294 | type VI secretion system | TssI |
14 | BP1026B_II0582 (tagAB-4) | 721582..723798 [+], 2217 | 386864295 | type VI secretion system | |
15 | BP1026B_II0583 (tagB-4) | 723798..724868 [+], 1071 | 386864296 | type VI secretion system | |
16 | BP1026B_II0584 (tagC-4) | 724871..725587 [+], 717 | 386864297 | type VI secretion system | |
17 | BP1026B_II0586 (tagD-4) | 725630..726019 [+], 390 | 386864298 | type VI secretion system | |
18 | BP1026B_II0585 (tssJ-4) | 726037..726618 [+], 582 | 386864299 | type VI secretion system | TssJ |
19 | BP1026B_II0587 (tssK-4) | 726615..727976 [+], 1362 | 386864300 | type VI secretion system | TssK |
20 | BP1026B_II0588 (tssL-4) | 728002..729717 [+], 1716 | 386864301 | type VI secretion system | TssL |
21 | BP1026B_II0589 (tssM-4) | 729714..733217 [+], 3504 | 386864302 | type VI secretion system | TssM |
22 | BP1026B_II0590 | 733276..733635 [+], 360 | 386864303 | hypothetical protein | |
23 | BP1026B_II0591 | 733790..734083 [+], 294 | 386864304 | hypothetical protein | |
24 | BP1026B_II0592 | 734308..734679 [+], 372 | 386864305 | hypothetical protein | |
25 | BP1026B_II0593 | 735230..736129 [+], 900 | 386864306 | rhamnosyltransferase 1, subunit A | |
26 | BP1026B_II0594 | 736288..737682 [+], 1395 | 386864307 | rhamnosyltransferase I, subunit B | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein
V. Investigation of the genomic context of the T6SS gene cluster.