 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | BP1026B_II1582 | 2000759..2001784 [+], 1026 | 386865270 | N-acetylmuramoyl-L-alanine amidase domain-containing protein | |
2 | BP1026B_II1583 | 2001912..2003312 [+], 1401 | 386865271 | hypothetical protein | |
3 | BP1026B_II1584 | 2003440..2004885 [+], 1446 | 386865272 | intracellular motility protein A | |
4 | BP1026B_II1585 | 2004965..2005342 [+], 378 | 386865273 | hypothetical protein | |
5 | BP1026B_II1586 (tssA-5) | 2005585..2007483 [-], 1899 | 386865274 | type VI secretion system | TssA |
6 | BP1026B_II1587 | 2007474..2008157 [-], 684 | 386865275 | DNA-binding response regulator | VirG |
7 | BP1026B_II1589 | 2008208..2010037 [-], 1830 | 386865276 | sensor histidine kinase | VirA |
8 | BP1026B_II1590 (tssB-5) | 2010297..2010791 [+], 495 | 386865277 | type VI secretion system | TssB |
9 | BP1026B_II1588 (tssC-5) | 2010815..2012314 [+], 1500 | 386865278 | type VI secretion system | TssC |
10 | BP1026B_II1591 (hcp-5) | 2012534..2013043 [+], 510 | 386865279 | type VI secretion system | TssD |
11 | BP1026B_II1592 (tssE-5) | 2013036..2013497 [+], 462 | 386865280 | type VI secretion system | TssE |
12 | BP1026B_II1594 (tssF-5) | 2013534..2015276 [+], 1743 | 386865281 | type VI secretion system | TssF |
13 | BP1026B_II1593 (tssG-5) | 2015264..2016286 [+], 1023 | 386865282 | type VI secretion system | TssG |
14 | BP1026B_II1595 (clpV-5) | 2016273..2019356 [+], 3084 | 386865283 | type VI secretion system | TssH |
15 | BP1026B_II1596 (vgrG-5) | 2019383..2022406 [+], 3024 | 386865284 | type VI secretion system | TssI |
16 | BP1026B_II1597 (tagAB-5) | 2022432..2025074 [+], 2643 | 386865285 | type VI secretion system | |
17 | BP1026B_II1598 (tagB-5) | 2025092..2026156 [+], 1065 | 386865286 | type VI secretion system | |
18 | BP1026B_II1599 (tagC-5) | 2026153..2026905 [+], 753 | 386865287 | type VI secretion system | |
19 | BP1026B_II1600 (tagD-5) | 2026934..2027326 [+], 393 | 386865288 | type VI secretion system | |
20 | BP1026B_II1602 (tssJ-5) | 2027525..2028133 [+], 609 | 386865289 | type VI secretion system | TssJ |
21 | BP1026B_II1601 (tssK-5) | 2028166..2029563 [+], 1398 | 386865290 | type VI secretion system | TssK |
22 | BP1026B_II1603 (tssL-5) | 2029560..2030225 [+], 666 | 386865291 | type VI secretion system | TssL |
23 | BP1026B_II1604 (tssM-5) | 2030240..2034286 [+], 4047 | 386865292 | type VI secretion system | TssM |
24 | BP1026B_II1605 | 2034995..2036218 [+], 1224 | 386865293 | hypothetical protein | BMAA0729 (e) |
25 | BP1026B_II1606 | 2036382..2036675 [+], 294 | 386865294 | hypothetical protein | |
26 | BP1026B_II1608 | 2036626..2037090 [-], 465 | 386865295 | hypothetical protein | |
27 | BP1026B_II1607 | 2036680..2037312 [+], 633 | 386865296 | GTP cyclohydrolase I | |
28 | BP1026B_II1609 | 2037746..2037901 [+], 156 | 386865297 | hypothetical protein | |
|
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein