 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | BP1026B_II2250 | 2792307..2793029 [-], 723 | 386865911 | transposase | |
2 | BP1026B_II2252 | 2793290..2795170 [-], 1881 | 386865912 | YD repeat/RHS repeat protein | |
3 | BP1026B_II2253 | 2795100..2795768 [-], 669 | 386865913 | hypothetical protein | |
4 | BP1026B_II2254 (vgrG-6) | 2795826..2798030 [-], 2205 | 386865914 | type VI secretion system | TssI |
5 | BP1026B_II2255 (clpV-6) | 2798027..2800693 [-], 2667 | 386865915 | type VI secretion system | TssH |
6 | BP1026B_II2256 (tssG-6) | 2800706..2802118 [-], 1413 | 386865916 | type VI secretion system | TssG |
7 | BP1026B_II2257 (tssF-6) | 2802148..2804019 [-], 1872 | 386865917 | type VI secretion system | TssF |
8 | BP1026B_II2258 (tssE-6) | 2804024..2804560 [-], 537 | 386865918 | type VI secretion system | TssE |
9 | BP1026B_II2259 (hcp-6) | 2804591..2805082 [-], 492 | 386865919 | type VI secretion system | TssD |
10 | BP1026B_II2260 (tssC-6) | 2805142..2806650 [-], 1509 | 386865920 | type VI secretion system | TssC |
11 | BP1026B_II2261 (tssB-6) | 2806643..2807221 [-], 579 | 386865921 | type VI secretion system | TssB |
12 | BP1026B_II2262 (tssA-6) | 2807284..2808363 [-], 1080 | 386865922 | type VI secretion system | TssA |
13 | BP1026B_II2263 (ppkA-6) | 2808416..2811025 [-], 2610 | 386865923 | type VI secretion system | |
14 | BP1026B_II2264 (tagF-6) | 2811236..2812177 [-], 942 | 386865924 | type VI secretion system | |
15 | BP1026B_II2265 (tssM-6) | 2812174..2815803 [-], 3630 | 386865925 | type VI secretion system | TssM |
16 | BP1026B_II2266 (tssL-6) | 2815806..2817122 [-], 1317 | 386865926 | type VI secretion system | TssL |
17 | BP1026B_II2267 (tssK-6) | 2817138..2818541 [-], 1404 | 386865927 | type VI secretion system | TssK |
18 | BP1026B_II2268 (tssJ-6) | 2818538..2819113 [-], 576 | 386865928 | type VI secretion system | TssJ |
19 | BP1026B_II2269 (tagI-6) | 2819564..2820097 [+], 534 | 386865929 | type VI secretion system | |
20 | BP1026B_II2270 (fha-6) | 2820152..2821588 [+], 1437 | 386865930 | type VI secretion system | Fha |
21 | BP1026B_II2271 | 2821631..2823529 [-], 1899 | 386865931 | hypothetical protein | |
|
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein