 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | YPTB3236 (insA) | 3812320..3812595 [-], 276 | 51597543 | insertion sequence protein | |
2 | YPTB3237 | 3812691..3813458 [-], 768 | 51597544 | hypothetical protein | |
3 | YPTB3238 | 3813445..3815742 [-], 2298 | 51597545 | hypothetical protein | |
4 | YPTB3242 (insA) | 3817314..3817589 [-], 276 | 51597546 | insertion sequence protein | |
5 | YPTB3243 | 3817986..3818486 [-], 501 | 51597547 | hypothetical protein | |
6 | YPTB3244 | 3818487..3820709 [-], 2223 | 51597548 | hypothetical protein | |
7 | YPTB3245 | 3820724..3823072 [-], 2349 | 51597549 | hypothetical protein | TssI |
8 | YPTB3246 (clpB3) | 3823069..3825717 [-], 2649 | 51597550 | Clp ATPase | TssH |
9 | YPTB3247 | 3826135..3826626 [-], 492 | 51597551 | hypothetical protein | TssD |
10 | YPTB3248 | 3826630..3828366 [-], 1737 | 51597552 | PAL/OmpA family membrane protein | TagL |
11 | YPTB3249 | 3828366..3829052 [-], 687 | 51597553 | hypothetical protein | TssL |
12 | YPTB3250 | 3829049..3830401 [-], 1353 | 51597554 | hypothetical protein | TssK |
13 | YPTB3251 | 3830413..3831957 [-], 1545 | 51597555 | hypothetical protein | TssC |
14 | YPTB3252 | 3832006..3832506 [-], 501 | 51597556 | hypothetical protein | TssB |
15 | YPTB3255 (insA) | 3834445..3834708 [-], 264 | 51597557 | insertion element protein | |
16 | YPTB3256 | 3834776..3835171 [-], 396 | 51597558 | lipoprotein | |
17 | YPTB3257 | 3835622..3836272 [-], 651 | 51597559 | hypothetical protein | |
18 | YPTB3258 (yspI) | 3837443..3838093 [+], 651 | 51597560 | N-acylhomoserine lactone synthase | |
19 | YPTB3259 (yspR) | 3838074..3838817 [-], 744 | 51597561 | quorum-sensing transcriptional regulator | |
20 | YPTB3260 | 3839379..3840737 [+], 1359 | 51597562 | hypothetical protein | |
21 | YPTB3261 | 3841125..3841958 [+], 834 | 51597563 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein