 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | W5S_2405 | 2589144..2589887 [-], 744 | 470154863 | Phospholipase A accessory protein | |
2 | W5S_2406 | 2589949..2590623 [-], 675 | 470154864 | Fibronectin type 3 and ankyrin repeat domains 1 protein | |
3 | W5S_2407 | 2590721..2592013 [-], 1293 | 470154865 | Propable Phospholipase A1 | |
4 | W5S_2408 | 2592006..2593160 [-], 1155 | 470154866 | Aec14 | |
5 | W5S_2409 | 2593163..2595301 [-], 2139 | 470154867 | Type VI secretion system Vgr family protein | TssI |
6 | W5S_2410 | 2595348..2595740 [-], 393 | 470154868 | Type VI secretion protein TssI | |
7 | W5S_2411 | 2595750..2596355 [-], 606 | 470154869 | hypothetical protein | |
8 | W5S_2412 | 2596368..2597054 [-], 687 | 470154870 | QnrD | |
9 | W5S_2413 | 2597017..2597439 [-], 423 | 470154871 | Hypothetical protein | |
10 | W5S_2414 | 2597436..2598257 [-], 822 | 470154872 | Pentapeptide repeat protein | |
11 | W5S_2415 | 2598609..2599976 [-], 1368 | 470154873 | Pentapeptide repeat-containing protein | |
12 | W5S_2416 | 2600077..2600460 [-], 384 | 470154874 | Hypothetical protein | |
13 | W5S_2417 | 2600753..2601127 [-], 375 | 470154875 | Hypothetical protein | |
14 | W5S_2418 | 2601429..2601809 [-], 381 | 470154876 | Hypothetical protein | |
15 | W5S_2419 | 2601818..2602288 [-], 471 | 470154877 | Hypothetical protein | |
16 | W5S_2420 | 2602263..2604026 [-], 1764 | 470154878 | Rhs element Vgr protein | TssI |
17 | W5S_2421 | 2604044..2605474 [-], 1431 | 470154879 | Transmembrane serine/threonine-protein kinase L pknL | |
18 | W5S_2422 | 2605504..2608113 [-], 2610 | 470154880 | Type VI secretion ATPase, ClpV1 family | TssH |
19 | W5S_2423 | 2608169..2609218 [-], 1050 | 470154881 | Type VI secretion protein, VC_A0111 family | TssG |
20 | W5S_2424 | 2609215..2611089 [-], 1875 | 470154882 | Type VI secretion protein, VC_A0110 family | TssF |
21 | W5S_2425 | 2611092..2611667 [-], 576 | 470154883 | Type VI secretion system lysozyme like protein | TssE |
22 | W5S_2426 | 2611657..2612484 [-], 828 | 470154884 | Virulence protein SciE type | TagJ |
23 | W5S_2427 | 2612501..2613478 [-], 978 | 470154885 | hypothetical protein | |
24 | W5S_2428 | 2613489..2614280 [-], 792 | 470154886 | Protein serine/threonine phosphatase | |
25 | W5S_2429 | 2614277..2616091 [-], 1815 | 470154887 | Forkhead-associated (FHA) protein | Fha |
26 | W5S_2430 | 2616352..2617011 [-], 660 | 470154888 | Bacterial SH3 domain protein | |
27 | W5S_2431 | 2617028..2617474 [-], 447 | 470154889 | Hypothetical protein | |
28 | W5S_2432 | 2617529..2618011 [-], 483 | 470154890 | Type VI secretion system effector, Hcp1 family | TssD |
29 | W5S_2433 | 2618320..2619819 [-], 1500 | 470154891 | Type VI secretion protein, EvpB/VC_A0108 family | TssC |
30 | W5S_2434 | 2619819..2620349 [-], 531 | 470154892 | Type VI secretion protein, VC_A0107 family | TssB |
31 | W5S_2435 | 2620429..2621448 [-], 1020 | 470154893 | Type VI secretion-associated protein, ImpA family | TssA |
32 | W5S_2436 | 2621460..2622167 [-], 708 | 470154894 | Type VI secretion-associated protein, BMA_A0400 family | |
33 | W5S_2437 | 2622182..2625778 [-], 3597 | 470154895 | Type VI secretion protein IcmF | TssM |
34 | W5S_2438 | 2625804..2627045 [-], 1242 | 470154896 | Type IV / VI secretion system protein, DotU family | TssL |
35 | W5S_2439 | 2627065..2628405 [-], 1341 | 470154897 | Type VI secretion protein, VC_A0114 family | TssK |
36 | W5S_2440 | 2628415..2628906 [-], 492 | 470154898 | Type VI secretion lipoprotein/VasD | TssJ |
37 | W5S_2441 | 2628933..2629502 [-], 570 | 470154899 | hypothetical protein | |
38 | W5S_2442 | 2630531..2631592 [-], 1062 | 470154900 | Outer membrane protein romA | |
39 | W5S_2443 | 2631836..2632561 [+], 726 | 470154901 | Manganese ABC transporter, ATP-binding protein | |
40 | W5S_2444 | 2632561..2633451 [+], 891 | 470154902 | Manganese transport system membrane protein MntB | |
41 | W5S_2445 | 2633458..2633745 [+], 288 | 470154903 | Hypothetical protein | |
|
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein