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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | ABTJ_RS11795 | 2475310..2476488 [-], 1179 | 446736559 | cyanate transporter | |
2 | ABTJ_RS11800 | 2476488..2476970 [-], 483 | 446569383 | nucleoside deaminase | |
3 | ABTJ_RS11805 | 2476986..2477633 [-], 648 | 1190339449 | ankyrin repeat domain-containing protein | |
4 | ABTJ_RS11810 | 2477806..2478657 [+], 852 | 446382329 | LysR family transcriptional regulator | |
5 | ABTJ_RS11815 | 2478660..2479613 [-], 954 | 446895327 | M15 family metallopeptidase | |
6 | ABTJ_RS11820 | 2479621..2480223 [-], 603 | 445968596 | hypothetical protein | |
7 | ABTJ_RS11825 | 2480236..2481042 [-], 807 | 446005770 | type IVB secretion system protein IcmH/DotU | TssL |
8 | ABTJ_RS11830 (tssK) | 2481060..2482424 [-], 1365 | 446393590 | type VI secretion system baseplate subunit TssK | TssK |
9 | ABTJ_RS11835 (tssA) | 2482441..2483535 [-], 1095 | 445942858 | type VI secretion system protein TssA | TssA |
10 | ABTJ_RS11840 (tssH) | 2483559..2486240 [-], 2682 | 487927950 | type VI secretion system ATPase TssH | TssH |
11 | ABTJ_RS11845 | 2486460..2486723 [-], 264 | 446090257 | PAAR domain-containing protein | |
12 | ABTJ_RS11850 | 2486740..2487507 [-], 768 | 446995154 | OmpA family protein | |
13 | ABTJ_RS11855 (tagF) | 2487510..2488469 [-], 960 | 446479387 | type VI secretion system-associated protein TagF | |
14 | ABTJ_RS11860 (tssM) | 2488507..2492331 [-], 3825 | 446479060 | type VI secretion system membrane subunit TssM | TssM |
15 | ABTJ_RS11865 | 2492362..2493774 [-], 1413 | 446514536 | hypothetical protein | |
16 | ABTJ_RS11870 (tssG) | 2493771..2494769 [-], 999 | 447113139 | type VI secretion system baseplate subunit TssG | TssG |
17 | ABTJ_RS11875 (tssF) | 2494733..2496544 [-], 1812 | 446490978 | type VI secretion system baseplate subunit TssF | TssF |
18 | ABTJ_RS11880 (tssE) | 2496561..2497037 [-], 477 | 446969775 | type VI secretion system baseplate subunit TssE | TssE |
19 | ABTJ_RS11885 | 2497117..2497620 [-], 504 | 446575849 | type VI secretion system tube protein Hcp | TssD |
20 | ABTJ_RS11890 (tssC) | 2497670..2499151 [-], 1482 | 446989267 | type VI secretion system contractile sheath large subunit | TssC |
21 | ABTJ_RS11895 (tssB) | 2499144..2499647 [-], 504 | 447041786 | type VI secretion system contractile sheath small subunit | TssB |
22 | ABTJ_RS11900 | 2499664..2500356 [-], 693 | 446792453 | hypothetical protein | |
23 | ABTJ_RS11905 | 2501445..2501846 [+], 402 | 445992937 | hypothetical protein | |
24 | ABTJ_RS11910 | 2501942..2502886 [+], 945 | 446464671 | ABC transporter permease | |
25 | ABTJ_RS11915 | 2502886..2503767 [+], 882 | 446922835 | ABC transporter ATP-binding protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein