I. Summary

SecReT6 ID	655
Strain	Escherichia blattae DSM 4481
Replicon	chromosome [Browse all T6SS(s) in this replicon]
Accession	NC_017910
Location	1179502..1226202
Comment
Function	N/A
T6SS Type	Type i; subtype i2
Bioinformatics investigation has been performed on this T6SS.

II. T6SS components

Component	TssH	TssD	TssL	TssI	TssA	TssB	TssC	TssE	TssF
Number	1	1	1	2	1	1	1	0	1
Component	TssG	TssJ	TssK	TssM
Number	1	1	1	1

III. genome coordinates of the T6SS gene cluster
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Note
1	EBL_c11460	1174993..1175994 [+], 1002	387888463	polysulfide reductase-like protein
2	EBL_c11470	1175987..1179058 [+], 3072	387888464	putative molybdopterin oxidoreductase family protein
3	EBL_c11480	1179502..1179999 [+], 498	387888465	hypothetical protein	TssB
4	EBL_c11490	1180039..1181580 [+], 1542	387888466	hypothetical protein	TssC
5	EBL_c11500	1181599..1182948 [+], 1350	387888467	hypothetical protein	TssK
6	EBL_c11510	1182945..1183697 [+], 753	387888468	hypothetical protein	TssL
7	EBL_c11520	1183697..1185379 [+], 1683	387888469	putative OmpA family protein	TagL
8	EBL_c11530	1185384..1185875 [+], 492	387888470	hypothetical protein	TssD
9	EBL_c11540	1186153..1188798 [+], 2646	387888471	hypothetical protein	TssH
10	EBL_c11550	1188798..1191152 [+], 2355	387888472	VGR-related protein	TssI
11	EBL_c11560	1191164..1193449 [+], 2286	387888473	hypothetical protein
12	EBL_c11570	1193446..1193820 [+], 375	387888474	hypothetical protein
13	EBL_c11580	1193997..1194488 [+], 492	387888475	hypothetical protein
14	EBL_c11590	1195042..1195368 [+], 327	387888476	hypothetical protein
15	EBL_c11600	1195406..1195672 [+], 267	387888477	putative tansposase
16	EBL_c11610	1195693..1196493 [+], 801	387888478	integrase-like protein
17	EBL_c11620	1196569..1197180 [+], 612	387888479	hypothetical protein
18	EBL_c11630	1197298..1199793 [+], 2496	387888480	hypothetical protein
19	EBL_c11640	1199790..1200644 [+], 855	387888481	hypothetical protein
20	EBL_c11650	1201088..1201531 [+], 444	387888482	hypothetical protein
21	EBL_c11660	1201832..1202617 [+], 786	387888483	hypothetical protein
22	EBL_c11670	1202893..1205220 [+], 2328	387888484	hypothetical protein
23	EBL_c11680	1205245..1205994 [+], 750	387888485	hypothetical protein
24	EBL_c11690	1206119..1206469 [+], 351	387888486	hypothetical protein
25	EBL_c11700	1206453..1207241 [+], 789	387888487	hypothetical protein
26	EBL_c11710	1207389..1207640 [+], 252	387888488	hypothetical protein
27	EBL_c11720	1207670..1208356 [+], 687	387888489	hypothetical protein
28	EBL_c11730	1208460..1209839 [+], 1380	387888490	hypothetical protein
29	EBL_c11740	1209870..1210622 [+], 753	387888491	hypothetical protein
30	EBL_c11750	1210651..1210917 [+], 267	387888492	hypothetical protein
31	EBL_c11760	1211075..1211896 [+], 822	387888493	hypothetical protein
32	EBL_c11770	1212067..1212447 [+], 381	387888494	hypothetical protein
33	EBL_c11780	1212784..1213671 [+], 888	387888495	hypothetical protein
34	EBL_c11790	1213976..1215136 [+], 1161	387888496	hypothetical protein
35	EBL_c11800	1215163..1218534 [+], 3372	387888497	IcmF-like protein	TssM
36	EBL_c11810	1218535..1220154 [+], 1620	387888498	ImpA-related protein	TssA
37	EBL_c11820	1220231..1222000 [+], 1770	387888499	hypothetical protein	TssF
38	EBL_c11830	1221964..1223043 [+], 1080	387888500	hypothetical protein	TssG
39	EBL_c11840	1223106..1223633 [+], 528	387888501	hypothetical protein	TssJ
40	EBL_c11850	1223638..1226202 [+], 2565	387888502	VGR-related protein	TssI
41	EBL_c11860	1226199..1227752 [+], 1554	387888503	hypothetical protein
42	EBL_c11870	1227752..1228894 [+], 1143	387888504	hypothetical protein
43	EBL_c11880	1229003..1229344 [+], 342	387888505	hypothetical protein
44	EBL_c11890	1229354..1230583 [+], 1230	387888506	hypothetical protein

 Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

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Proteins        Genes

V. Investigation of the genomic context of the T6SS gene cluster.

1. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the mobile genetic elements database, ACLAME.

Job_id: Replicon RefSeq: T6SS Region Start (bp): T6SS Region End (bp): Upstream Region (kb): Downstream Region (kb):

2. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the virulence factor database, VFDB.

Job_id: Replicon RefSeq: T6SS Region Start (bp): T6SS Region End (bp): Upstream Region (kb): Downstream Region (kb):

3. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against against the antibiotic resistance database, ARDB.

Job_id: Replicon RefSeq: T6SS Region Start (bp): T6SS Region End (bp): Upstream Region (kb): Downstream Region (kb):

Homology Effector list

EC042_4529

Effector identified
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Homolog
1	EBL_c11530	1185384..1185875 [+], 492	387888470	hypothetical protein	EC042_4529

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Proteins        Genes

N/A

N/A