 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | EBL_c11460 | 1174993..1175994 [+], 1002 | 387888463 | polysulfide reductase-like protein | |
2 | EBL_c11470 | 1175987..1179058 [+], 3072 | 387888464 | putative molybdopterin oxidoreductase family protein | |
3 | EBL_c11480 | 1179502..1179999 [+], 498 | 387888465 | hypothetical protein | TssB |
4 | EBL_c11490 | 1180039..1181580 [+], 1542 | 387888466 | hypothetical protein | TssC |
5 | EBL_c11500 | 1181599..1182948 [+], 1350 | 387888467 | hypothetical protein | TssK |
6 | EBL_c11510 | 1182945..1183697 [+], 753 | 387888468 | hypothetical protein | TssL |
7 | EBL_c11520 | 1183697..1185379 [+], 1683 | 387888469 | putative OmpA family protein | TagL |
8 | EBL_c11530 | 1185384..1185875 [+], 492 | 387888470 | hypothetical protein | TssD |
9 | EBL_c11540 | 1186153..1188798 [+], 2646 | 387888471 | hypothetical protein | TssH |
10 | EBL_c11550 | 1188798..1191152 [+], 2355 | 387888472 | VGR-related protein | TssI |
11 | EBL_c11560 | 1191164..1193449 [+], 2286 | 387888473 | hypothetical protein | |
12 | EBL_c11570 | 1193446..1193820 [+], 375 | 387888474 | hypothetical protein | |
13 | EBL_c11580 | 1193997..1194488 [+], 492 | 387888475 | hypothetical protein | |
14 | EBL_c11590 | 1195042..1195368 [+], 327 | 387888476 | hypothetical protein | |
15 | EBL_c11600 | 1195406..1195672 [+], 267 | 387888477 | putative tansposase | |
16 | EBL_c11610 | 1195693..1196493 [+], 801 | 387888478 | integrase-like protein | |
17 | EBL_c11620 | 1196569..1197180 [+], 612 | 387888479 | hypothetical protein | |
18 | EBL_c11630 | 1197298..1199793 [+], 2496 | 387888480 | hypothetical protein | |
19 | EBL_c11640 | 1199790..1200644 [+], 855 | 387888481 | hypothetical protein | |
20 | EBL_c11650 | 1201088..1201531 [+], 444 | 387888482 | hypothetical protein | |
21 | EBL_c11660 | 1201832..1202617 [+], 786 | 387888483 | hypothetical protein | |
22 | EBL_c11670 | 1202893..1205220 [+], 2328 | 387888484 | hypothetical protein | |
23 | EBL_c11680 | 1205245..1205994 [+], 750 | 387888485 | hypothetical protein | |
24 | EBL_c11690 | 1206119..1206469 [+], 351 | 387888486 | hypothetical protein | |
25 | EBL_c11700 | 1206453..1207241 [+], 789 | 387888487 | hypothetical protein | |
26 | EBL_c11710 | 1207389..1207640 [+], 252 | 387888488 | hypothetical protein | |
27 | EBL_c11720 | 1207670..1208356 [+], 687 | 387888489 | hypothetical protein | |
28 | EBL_c11730 | 1208460..1209839 [+], 1380 | 387888490 | hypothetical protein | |
29 | EBL_c11740 | 1209870..1210622 [+], 753 | 387888491 | hypothetical protein | |
30 | EBL_c11750 | 1210651..1210917 [+], 267 | 387888492 | hypothetical protein | |
31 | EBL_c11760 | 1211075..1211896 [+], 822 | 387888493 | hypothetical protein | |
32 | EBL_c11770 | 1212067..1212447 [+], 381 | 387888494 | hypothetical protein | |
33 | EBL_c11780 | 1212784..1213671 [+], 888 | 387888495 | hypothetical protein | |
34 | EBL_c11790 | 1213976..1215136 [+], 1161 | 387888496 | hypothetical protein | |
35 | EBL_c11800 | 1215163..1218534 [+], 3372 | 387888497 | IcmF-like protein | TssM |
36 | EBL_c11810 | 1218535..1220154 [+], 1620 | 387888498 | ImpA-related protein | TssA |
37 | EBL_c11820 | 1220231..1222000 [+], 1770 | 387888499 | hypothetical protein | TssF |
38 | EBL_c11830 | 1221964..1223043 [+], 1080 | 387888500 | hypothetical protein | TssG |
39 | EBL_c11840 | 1223106..1223633 [+], 528 | 387888501 | hypothetical protein | TssJ |
40 | EBL_c11850 | 1223638..1226202 [+], 2565 | 387888502 | VGR-related protein | TssI |
41 | EBL_c11860 | 1226199..1227752 [+], 1554 | 387888503 | hypothetical protein | |
42 | EBL_c11870 | 1227752..1228894 [+], 1143 | 387888504 | hypothetical protein | |
43 | EBL_c11880 | 1229003..1229344 [+], 342 | 387888505 | hypothetical protein | |
44 | EBL_c11890 | 1229354..1230583 [+], 1230 | 387888506 | hypothetical protein | |
|
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein