 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | MYA_4711 | 1947637..1948410 [+], 774 | 387905457 | ISPsy4, transposition helper protein | |
2 | MYA_4713 | 1951861..1952511 [-], 651 | 387905458 | type VI secretion lipoprotein/VasD | TssJ |
3 | MYA_4714 | 1952558..1953574 [-], 1017 | 387905459 | type VI secretion protein ImpH/VasB | TssG |
4 | MYA_4715 | 1953637..1955451 [-], 1815 | 387905460 | type VI secretion protein ImpG/VasA | TssF |
5 | MYA_4716 | 1955468..1958524 [-], 3057 | 387905461 | hypothetical protein | TssM |
6 | MYA_4717 | 1958813..1958965 [+], 153 | 387905462 | hypothetical protein | |
7 | MYA_4718 | 1960314..1962290 [-], 1977 | 387905463 | transmembrane protein | |
8 | MYA_4719 | 1963582..1965897 [-], 2316 | 387905464 | VgrG protein | TssI |
9 | MYA_4720 | 1965886..1966089 [+], 204 | 387905465 | hypothetical protein | |
10 | MYA_4721 | 1966355..1967677 [+], 1323 | 387905466 | type VI secretion protein ImpC/EvpB | TssC |
11 | MYA_4722 | 1967674..1969080 [+], 1407 | 387905467 | type VI secretion protein ImpJ/VasE | TssK |
12 | MYA_4723 | 1969254..1969739 [+], 486 | 387905468 | hypothetical protein | TssL |
13 | MYA_4724 | 1969812..1970183 [+], 372 | 387905469 | type VI secretion system lysozyme-related protein | TssE |
14 | MYA_4725 | 1970202..1970324 [-], 123 | 387905470 | hypothetical protein | |
15 | MYA_4726 | 1970421..1971608 [-], 1188 | 387905471 | Outer membrane porin protein 32 | |
16 | MYA_4727 | 1972367..1973731 [-], 1365 | 387905472 | Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductase | |
17 | MYA_4728 | 1973776..1974543 [-], 768 | 387905473 | Histidine ABC transporter, permease protein HisM | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein