 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | ES15_2802 | 3016212..3016925 [-], 714 | 389841802 | N-acetyltransferase GCN5 | |
2 | ES15_2803 | 3017063..3018223 [+], 1161 | 389841803 | carboxylate-amine ligase | |
3 | ES15_2804 | 3018488..3020395 [+], 1908 | 389841804 | methyl-accepting chemotaxis protein | |
4 | ES15_2805 | 3020873..3021355 [-], 483 | 389841805 | hypothetical protein | TssE |
5 | ES15_2806 (impE1) | 3021365..3022162 [-], 798 | 389841806 | ImpE family protein | TagJ |
6 | ES15_2807 | 3022180..3022968 [-], 789 | 389841807 | hypothetical protein | |
7 | ES15_2808 | 3022974..3023234 [-], 261 | 389841808 | hypothetical protein | PAAR |
8 | ES15_2809 | 3023290..3025725 [-], 2436 | 389841809 | hypothetical protein | TssI |
9 | ES15_2810 | 3025765..3026313 [-], 549 | 389841810 | hypothetical protein | |
10 | ES15_2811 (icmF) | 3026434..3027783 [-], 1350 | 389841811 | IcmF family protein | TssM |
11 | ES15_2812 | 3027813..3028472 [-], 660 | 389841812 | hypothetical protein | TssM |
12 | ES15_2813 (imcF) | 3028469..3030208 [-], 1740 | 389841813 | ImcF family protein | TssM |
13 | ES15_2814 (impK1) | 3030220..3031563 [-], 1344 | 389841814 | OmpA/MotB family protein 1 | TssL |
14 | ES15_2815 (impJ1) | 3031563..3032909 [-], 1347 | 389841815 | type VI secretion protein | TssK |
15 | ES15_2816 (vasD2) | 3032896..3033303 [-], 408 | 389841816 | type VI secretion lipoprotein, VC_A0113 family 1 | TssJ |
16 | ES15_2817 (hcp2) | 3033608..3034093 [-], 486 | 389841817 | type VI secretion system effector, Hcp1 family 2 | TssD |
17 | ES15_2818 (impC2) | 3034252..3035748 [-], 1497 | 389841818 | type VI secretion protein EvpB | TssC |
18 | ES15_2819 | 3035771..3036301 [-], 531 | 389841819 | type VI secretion protein | TssB |
19 | ES15_2820 | 3036391..3036552 [-], 162 | 389841820 | fimbrial protein, truncated | |
20 | ES15_2821 | 3036583..3036714 [+], 132 | 389841821 | fimbrial protein, truncated | |
21 | ES15_2822 (fimD3) | 3036972..3039572 [-], 2601 | 389841822 | fimbrial biogenesis outer membrane usher protein | |
22 | ES15_2823 | 3039660..3040130 [-], 471 | 389841823 | Gram-negative pili assembly chaperone | |
23 | ES15_2824 (fimA2) | 3040505..3041035 [-], 531 | 389841824 | frimbrial protein | |
24 | ES15_2825 (clpB2) | 3041099..3043792 [-], 2694 | 389841825 | Clp ATPase chaperone protein ClpB | TssH |
25 | ES15_2826 (impG) | 3044323..3046203 [+], 1881 | 389841826 | type VI secretion protein | TssF |
26 | ES15_2827 (impH1) | 3046203..3047231 [+], 1029 | 389841827 | type VI secretion protein | TssG |
27 | ES15_2828 (impA1) | 3047286..3048332 [+], 1047 | 389841828 | ImpA family protein | TssA |
28 | ES15_2829 | 3048337..3049332 [+], 996 | 389841829 | fimbrial protein | |
29 | ES15_2830 | 3049344..3050681 [+], 1338 | 389841830 | hypothetical protein | |
30 | ES15_2831 | 3050675..3051274 [+], 600 | 389841831 | hypothetical protein | |
31 | ES15_2832 (ompA2) | 3051338..3052897 [+], 1560 | 389841832 | OmpA/MotB family protein 2 | TagL |
32 | ES15_2833 | 3052890..3053375 [+], 486 | 389841833 | hypothetical protein | |
33 | ES15_2834 | 3053439..3054392 [-], 954 | 389841834 | MarR family transcriptional regulator with acetyltransferase activity | |
34 | ES15_2835 (ygaP) | 3054459..3054995 [-], 537 | 389841835 | Inner membrane protein YgaP | |
35 | ES15_2836 | 3054997..3055302 [-], 306 | 389841836 | ArsR family transcriptional regulator | |
36 | ES15_2837 | 3055508..3056701 [+], 1194 | 389841837 | major facilitator superfamily protein | |
37 | ES15_2838 | 3056811..3057164 [+], 354 | 389841838 | hypothetical protein | |
38 | ES15_2839 | 3057169..3057648 [-], 480 | 389841839 | RES domain-containing protein | |
|
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein