SecReT6

T6SS
Effector
Immunity
Reference

I. Summary

SecReT6 ID	665
Strain	Tistrella mobilis KA081020-065
Replicon	plasmid pTM1 [Browse all T6SS(s) in this replicon]
Accession	NC_017957
Location	66195..103272
Comment
Function	N/A
T6SS Type	Type i; subtype i5
Bioinformatics investigation has been performed on this T6SS.

II. T6SS components

Component	TssH	TssD	TssL	TssI	TssA	TssB	TssC	TssE	TssF
Number	1	1	1	2	1	1	2	1	1
Component	TssG	TssJ	TssK	TssM
Number	1	1	1	1


III. genome coordinates of the T6SS gene cluster
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Note
1	TMO_a0063	61816..62520 [-], 705	389875315	hypothetical protein
2	TMO_a0064	62658..63257 [-], 600	389875316	hypothetical protein
3	TMO_a0065	63254..63988 [-], 735	389875317	hypothetical protein
4	TMO_a0066	64061..65137 [-], 1077	389875318	hypothetical protein
5	TMO_a0067	65134..66168 [-], 1035	389875319	hypothetical protein
6	TMO_a0068	66195..68924 [-], 2730	389875320	vgrG protein	TssI
7	TMO_a0069	69058..69570 [-], 513	389875321	hypothetical protein
8	TMO_a0070	69567..71219 [-], 1653	389875322	hypothetical protein
9	TMO_a0071	71212..72438 [-], 1227	389875323	ABC transporter, permease protein
10	TMO_a0072 (macB)	72438..73142 [-], 705	389875324	Macrolide export ATP-binding/permease protein	TagT
11	TMO_a0073	73139..75115 [-], 1977	389875325	ppkA-related protein
12	TMO_a0074	75115..76542 [-], 1428	389875326	serine/threonine kinase
13	TMO_a0075 (prpC)	76535..77305 [-], 771	389875327	Ser/Thr protein phosphatase
14	TMO_a0076	77302..78018 [-], 717	389875328	hypothetical protein
15	TMO_a0077	78000..81725 [-], 3726	389875329	hypothetical protein	TssM
16	TMO_a0078	81725..83263 [-], 1539	389875330	hypothetical protein	TssL
17	TMO_a0079	83267..84610 [-], 1344	389875331	hypothetical protein	TssK
18	TMO_a0080	84669..85178 [-], 510	389875332	type VI secretion lipoprotein, VC_A0113 family	TssJ
19	TMO_a0081	85211..86617 [-], 1407	389875333	FHA domain-containing protein	Fha
20	TMO_a0082	86661..89264 [-], 2604	389875334	type VI secretion ATPase, ClpV1 family	TssH
21	TMO_a0083	89334..90365 [-], 1032	389875335	type VI secretion system protein ImpH	TssG
22	TMO_a0084	90375..92216 [-], 1842	389875336	type VI secretion system protein ImpG	TssF
23	TMO_a0085	92213..92731 [-], 519	389875337	type VI secretion system protein ImpF	TssE
24	TMO_a0086	92728..93597 [-], 870	389875338	type VI secretion system protein ImpE	TagJ
25	TMO_a0087	93663..95063 [-], 1401	389875339	type VI secretion system protein ImpC	TssC
26	TMO_a0088	95080..96576 [-], 1497	389875340	type VI secretion system protein ImpC	TssC
27	TMO_a0089	96582..97115 [-], 534	389875341	type VI secretion protein	TssB
28	TMO_a0090	97175..98317 [-], 1143	389875342	impA-related N-terminal protein	TssA
29	TMO_a0091	98634..99083 [-], 450	389875343	peptidase S1 and S6, chymotrypsin/Hap
30	TMO_a0092	99418..99891 [+], 474	389875344	hypothetical protein	TssD
31	TMO_a0093	100070..100681 [+], 612	389875345	hypothetical protein
32	TMO_a0094	100695..101285 [+], 591	389875346	hypothetical protein
33	TMO_a0095	101290..103272 [+], 1983	389875347	VgrG protein	TssI
34	TMO_a0096	103322..104083 [+], 762	389875348	hypothetical protein
35	TMO_a0097	104130..104543 [+], 414	389875349	hypothetical protein

Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

Download FASTA format files

Proteins Genes

V. Investigation of the genomic context of the T6SS gene cluster.

N/A