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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | TMO_a0063 | 61816..62520 [-], 705 | 389875315 | hypothetical protein | |
2 | TMO_a0064 | 62658..63257 [-], 600 | 389875316 | hypothetical protein | |
3 | TMO_a0065 | 63254..63988 [-], 735 | 389875317 | hypothetical protein | |
4 | TMO_a0066 | 64061..65137 [-], 1077 | 389875318 | hypothetical protein | |
5 | TMO_a0067 | 65134..66168 [-], 1035 | 389875319 | hypothetical protein | |
6 | TMO_a0068 | 66195..68924 [-], 2730 | 389875320 | vgrG protein | TssI |
7 | TMO_a0069 | 69058..69570 [-], 513 | 389875321 | hypothetical protein | |
8 | TMO_a0070 | 69567..71219 [-], 1653 | 389875322 | hypothetical protein | |
9 | TMO_a0071 | 71212..72438 [-], 1227 | 389875323 | ABC transporter, permease protein | |
10 | TMO_a0072 (macB) | 72438..73142 [-], 705 | 389875324 | Macrolide export ATP-binding/permease protein | TagT |
11 | TMO_a0073 | 73139..75115 [-], 1977 | 389875325 | ppkA-related protein | |
12 | TMO_a0074 | 75115..76542 [-], 1428 | 389875326 | serine/threonine kinase | |
13 | TMO_a0075 (prpC) | 76535..77305 [-], 771 | 389875327 | Ser/Thr protein phosphatase | |
14 | TMO_a0076 | 77302..78018 [-], 717 | 389875328 | hypothetical protein | |
15 | TMO_a0077 | 78000..81725 [-], 3726 | 389875329 | hypothetical protein | TssM |
16 | TMO_a0078 | 81725..83263 [-], 1539 | 389875330 | hypothetical protein | TssL |
17 | TMO_a0079 | 83267..84610 [-], 1344 | 389875331 | hypothetical protein | TssK |
18 | TMO_a0080 | 84669..85178 [-], 510 | 389875332 | type VI secretion lipoprotein, VC_A0113 family | TssJ |
19 | TMO_a0081 | 85211..86617 [-], 1407 | 389875333 | FHA domain-containing protein | Fha |
20 | TMO_a0082 | 86661..89264 [-], 2604 | 389875334 | type VI secretion ATPase, ClpV1 family | TssH |
21 | TMO_a0083 | 89334..90365 [-], 1032 | 389875335 | type VI secretion system protein ImpH | TssG |
22 | TMO_a0084 | 90375..92216 [-], 1842 | 389875336 | type VI secretion system protein ImpG | TssF |
23 | TMO_a0085 | 92213..92731 [-], 519 | 389875337 | type VI secretion system protein ImpF | TssE |
24 | TMO_a0086 | 92728..93597 [-], 870 | 389875338 | type VI secretion system protein ImpE | TagJ |
25 | TMO_a0087 | 93663..95063 [-], 1401 | 389875339 | type VI secretion system protein ImpC | TssC |
26 | TMO_a0088 | 95080..96576 [-], 1497 | 389875340 | type VI secretion system protein ImpC | TssC |
27 | TMO_a0089 | 96582..97115 [-], 534 | 389875341 | type VI secretion protein | TssB |
28 | TMO_a0090 | 97175..98317 [-], 1143 | 389875342 | impA-related N-terminal protein | TssA |
29 | TMO_a0091 | 98634..99083 [-], 450 | 389875343 | peptidase S1 and S6, chymotrypsin/Hap | |
30 | TMO_a0092 | 99418..99891 [+], 474 | 389875344 | hypothetical protein | TssD |
31 | TMO_a0093 | 100070..100681 [+], 612 | 389875345 | hypothetical protein | |
32 | TMO_a0094 | 100695..101285 [+], 591 | 389875346 | hypothetical protein | |
33 | TMO_a0095 | 101290..103272 [+], 1983 | 389875347 | VgrG protein | TssI |
34 | TMO_a0096 | 103322..104083 [+], 762 | 389875348 | hypothetical protein | |
35 | TMO_a0097 | 104130..104543 [+], 414 | 389875349 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein