 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | PADK2_17325 | 3743431..3743751 [+], 321 | 392984859 | hypothetical protein | |
2 | PADK2_17330 | 3743808..3744365 [+], 558 | 392984860 | hypothetical protein | |
3 | PADK2_17335 (folE) | 3744443..3744988 [+], 546 | 392984861 | GTP cyclohydrolase I | |
4 | PADK2_17340 | 3745053..3745514 [-], 462 | 392984862 | hypothetical protein | |
5 | PADK2_17345 | 3745760..3746140 [+], 381 | 392984863 | hypothetical protein | |
6 | PADK2_17350 | 3746168..3747157 [-], 990 | 392984864 | serine-threonine kinase Stk1 | Stk1 |
7 | PADK2_17355 | 3747154..3747882 [-], 729 | 392984865 | serine/threonine phosphoprotein phosphatase Stp1 | Stp1 |
8 | PADK2_17360 | 3747882..3751409 [-], 3528 | 392984866 | type VI secretion protein IcmF | TssM |
9 | PADK2_17365 | 3751425..3752294 [-], 870 | 392984867 | type VI secretion system protein ImpK | TssL |
10 | PADK2_17370 | 3752297..3753628 [-], 1332 | 392984868 | hypothetical protein | TssK |
11 | PADK2_17375 | 3753625..3754131 [-], 507 | 392984869 | lipoprotein | TssJ |
12 | PADK2_17380 | 3754137..3755330 [-], 1194 | 392984870 | hypothetical protein | Fha |
13 | PADK2_17385 | 3755348..3755488 [-], 141 | 392984871 | hypothetical protein | |
14 | PADK2_17390 | 3755577..3757088 [-], 1512 | 392984872 | transcriptional regulator | Sfa2 |
15 | PADK2_17395 | 3757099..3759726 [-], 2628 | 392984873 | ClpA/B-type protease | TssH |
16 | PADK2_17400 | 3759739..3760746 [-], 1008 | 392984874 | hypothetical protein | TssG |
17 | PADK2_17405 | 3760710..3762497 [-], 1788 | 392984875 | hypothetical protein | TssF |
18 | PADK2_17410 | 3762835..3763242 [-], 408 | 392984876 | hypothetical protein | TssE |
19 | PADK2_17415 | 3763255..3764730 [-], 1476 | 392984877 | hypothetical protein | TssC |
20 | PADK2_17420 | 3764759..3765265 [-], 507 | 392984878 | hypothetical protein | TssB |
21 | PADK2_17425 | 3765301..3766857 [-], 1557 | 392984879 | hypothetical protein | TssA |
22 | PADK2_17430 | 3768029..3768631 [-], 603 | 392984880 | glutathione S-transferase | |
23 | PADK2_17435 | 3768687..3769853 [-], 1167 | 392984881 | aminotransferase | |
24 | PADK2_17440 | 3769935..3770411 [+], 477 | 392984882 | transcriptional regulator | |
25 | PADK2_17445 | 3770462..3771097 [-], 636 | 392984883 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein