 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | A225_2620 | 2765928..2766647 [+], 720 | 397657634 | Aspartate racemase | |
2 | A225_2621 | 2766676..2767683 [+], 1008 | 397657635 | hypothetical protein | |
3 | A225_2622 | 2767680..2768450 [+], 771 | 397657636 | hypothetical protein | |
4 | A225_2624 | 2769504..2770067 [-], 564 | 397657637 | thiJ/PfpI family protein | |
5 | A225_2625 | 2770134..2770289 [+], 156 | 397657638 | hypothetical protein | |
6 | A225_2626 | 2770900..2771391 [+], 492 | 397657639 | hypothetical protein | TssB |
7 | A225_2627 | 2771426..2772967 [+], 1542 | 397657640 | hypothetical protein | TssC |
8 | A225_2628 | 2772981..2774324 [+], 1344 | 397657641 | hypothetical protein | TssK |
9 | A225_2629 | 2774321..2774986 [+], 666 | 397657642 | hypothetical protein | TssL |
10 | A225_2630 | 2774989..2776671 [+], 1683 | 397657643 | hypothetical protein | TagL |
11 | A225_2631 | 2776816..2777307 [+], 492 | 397657644 | hypothetical protein | TssD |
12 | A225_2632 | 2777307..2777438 [+], 132 | 397657645 | hypothetical protein | |
13 | A225_2633 | 2777554..2778141 [+], 588 | 397657646 | clpB protein | TssH |
14 | A225_2634 | 2778155..2780197 [+], 2043 | 397657647 | clpB protein | TssH |
15 | A225_2635 | 2780194..2782689 [+], 2496 | 397657648 | VgrG protein | TssI |
16 | A225_2636 | 2782942..2784909 [+], 1968 | 397657649 | transmembrane protein | |
17 | A225_2637 | 2785171..2786604 [+], 1434 | 397657650 | hypothetical protein | |
18 | A225_2638 | 2786745..2789978 [+], 3234 | 397657651 | hypothetical protein | TssM |
19 | A225_2639 | 2790074..2790352 [+], 279 | 397657652 | hypothetical protein | PAAR |
20 | A225_2640 | 2790365..2792125 [+], 1761 | 397657653 | protein ImpG/VasA | TssF |
21 | A225_2641 | 2792089..2793174 [+], 1086 | 397657654 | hypothetical protein | TssG |
22 | A225_2642 | 2793194..2793691 [+], 498 | 397657655 | hypothetical protein | TssJ |
23 | A225_2643 | 2793693..2794148 [+], 456 | 397657656 | hypothetical protein | TssE |
24 | A225_2644 | 2794172..2795506 [+], 1335 | 397657657 | hypothetical protein | TssA |
25 | A225_2645 | 2795669..2797348 [-], 1680 | 397657658 | beta-xylosidase | |
26 | A225_2646 | 2797403..2798857 [-], 1455 | 397657659 | Xyloside transporter XynT | |
27 | A225_2647 | 2799093..2800301 [+], 1209 | 397657660 | IS10 transposase | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein