 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | A225_3355 | 3525111..3526181 [-], 1071 | 397658357 | ABC transporter | |
2 | A225_3356 | 3526174..3527943 [-], 1770 | 397658358 | Ferric iron ABC transporter | |
3 | A225_3357 | 3528015..3529103 [-], 1089 | 397658359 | ABC transporter | |
4 | A225_3358 | 3529603..3530148 [-], 546 | 397658360 | hypothetical protein | TssJ |
5 | A225_3359 | 3530126..3531211 [-], 1086 | 397658361 | hypothetical protein | TssG |
6 | A225_3360 | 3531175..3532929 [-], 1755 | 397658362 | protein ImpG/VasA | TssF |
7 | A225_3361 | 3533283..3533486 [-], 204 | 397658363 | hypothetical protein | |
8 | A225_3362 | 3533797..3537267 [-], 3471 | 397658364 | hypothetical protein | TssM |
9 | A225_3363 | 3537264..3538538 [-], 1275 | 397658365 | hypothetical protein | |
10 | A225_3364 | 3541576..3541893 [-], 318 | 397658366 | hypothetical protein | |
11 | A225_3365 | 3542744..3545881 [-], 3138 | 397658367 | hypothetical protein | |
12 | A225_3366 | 3545929..3546213 [-], 285 | 397658368 | hypothetical protein | |
13 | A225_3367 | 3546717..3547040 [-], 324 | 397658369 | hypothetical protein | |
14 | A225_3369 | 3548430..3549155 [-], 726 | 397658370 | hypothetical protein | |
15 | A225_3370 | 3549260..3549889 [-], 630 | 397658371 | hypothetical protein | |
16 | A225_3371 | 3550101..3552986 [-], 2886 | 397658372 | hypothetical protein | |
17 | A225_3372 | 3553245..3554117 [-], 873 | 397658373 | hypothetical protein | |
18 | A225_3373 | 3554117..3556459 [-], 2343 | 397658374 | VgrG protein | TssI |
19 | A225_3374 | 3556456..3556767 [-], 312 | 397658375 | clpB protein | |
20 | A225_3375 | 3557108..3557599 [-], 492 | 397658376 | hypothetical protein | TssD |
21 | A225_3376 | 3557604..3559094 [-], 1491 | 397658377 | outer membrane protein | TagL |
22 | A225_3377 | 3559225..3559914 [-], 690 | 397658378 | hypothetical protein | TssL |
23 | A225_3378 | 3559911..3561251 [-], 1341 | 397658379 | hypothetical protein | TssK |
24 | A225_3379 | 3561272..3562810 [-], 1539 | 397658380 | hypothetical protein | TssC |
25 | A225_3380 | 3562845..3563336 [-], 492 | 397658381 | hypothetical protein | TssB |
26 | A225_3381 | 3563748..3563864 [-], 117 | 397658382 | hypothetical protein | |
27 | A225_3382 | 3564197..3565279 [+], 1083 | 397658383 | malate dehydrogenase | |
28 | A225_3383 | 3565517..3567667 [+], 2151 | 397658384 | formate dehydrogenase H | |
|
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein