 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | A225_4085 | 4304166..4304924 [+], 759 | 397659076 | transcriptional regulator | |
2 | A225_4086 | 4304974..4305981 [-], 1008 | 397659077 | Nucleoid-associated protein NdpA | |
3 | A225_4087 | 4306094..4306387 [+], 294 | 397659078 | hypothetical protein | |
4 | A225_4088 | 4306449..4308167 [+], 1719 | 397659079 | hydrolase of alkaline phosphatase superfamily | |
5 | A225_4090 | 4308440..4308592 [-], 153 | 397659080 | hypothetical protein | |
6 | A225_4091 | 4308615..4309067 [-], 453 | 397659081 | hypothetical protein | TssE |
7 | A225_4092 | 4309060..4309596 [-], 537 | 397659082 | hypothetical protein | TssJ |
8 | A225_4093 | 4309577..4310671 [-], 1095 | 397659083 | hypothetical protein | TssG |
9 | A225_4094 | 4310635..4312398 [-], 1764 | 397659084 | protein ImpG/VasA | TssF |
10 | A225_4095 | 4313128..4313265 [+], 138 | 397659085 | hypothetical protein | |
11 | A225_4096 | 4313221..4313415 [-], 195 | 397659086 | hypothetical protein | |
12 | A225_4097 | 4313405..4313767 [-], 363 | 397659087 | hypothetical protein | TssA |
13 | A225_4098 | 4313767..4317168 [-], 3402 | 397659088 | hypothetical protein | TssM |
14 | A225_4099 | 4317173..4318333 [-], 1161 | 397659089 | hypothetical protein | |
15 | A225_4100 | 4319310..4321214 [-], 1905 | 397659090 | hypothetical protein | |
16 | A225_4101 | 4321755..4324370 [-], 2616 | 397659091 | VgrG protein | TssI |
17 | A225_4102 | 4324957..4325880 [+], 924 | 397659092 | transposase | |
18 | A225_4103 | 4325925..4326368 [-], 444 | 397659093 | hypothetical protein | |
19 | A225_4104 | 4326534..4327637 [-], 1104 | 397659094 | clpB protein | TssH |
20 | A225_4105 | 4327978..4328469 [-], 492 | 397659095 | hypothetical protein | TssD |
21 | A225_4106 | 4328474..4330102 [-], 1629 | 397659096 | outer membrane protein | TagL |
22 | A225_4107 | 4330202..4330855 [-], 654 | 397659097 | transmembrane protein | TssL |
23 | A225_4108 | 4330852..4332189 [-], 1338 | 397659098 | hypothetical protein | TssK |
24 | A225_4109 | 4332208..4333758 [-], 1551 | 397659099 | hypothetical protein | TssC |
25 | A225_4110 | 4333795..4334292 [-], 498 | 397659100 | hypothetical protein | TssB |
26 | A225_4111 | 4335274..4336380 [+], 1107 | 397659101 | hypothetical protein | |
27 | A225_4112 | 4336583..4337074 [+], 492 | 397659102 | proteinase inhibitor I11 | |
28 | A225_4114 | 4337119..4338753 [-], 1635 | 397659103 | malate:quinone oxidoreductase | |
29 | A225_4113 | 4338723..4338854 [+], 132 | 397659104 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein