 |
| III. genome coordinates of the T6SS gene cluster |
| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
| 1 | T1E_0030 | 25822..27483 [+], 1662 | 397692800 | PAS/PAC sensor hybrid histidine kinase | |
| 2 | T1E_0031 | 27546..29612 [+], 2067 | 397692801 | PAS/PAC sensor hybrid histidine kinase | |
| 3 | T1E_0032 (ygfF) | 29622..30509 [-], 888 | 397692802 | short-chain dehydrogenase/reductase SDR | |
| 4 | T1E_0033 | 30683..32668 [+], 1986 | 397692803 | vgrG protein | TssI |
| 5 | T1E_0034 | 32716..33147 [+], 432 | 397692804 | hypothetical protein | |
6 | T1E_0035 (rhsD) | 33201..37787 [+], 4587 | 397692805 | RHS family protein | PAAR |
| 7 | T1E_0036 (rhsA) | 38518..40473 [+], 1956 | 397692806 | RHS family protein | |
| 8 | T1E_0037 | 41042..42088 [+], 1047 | 397692807 | RHS family protein | |
| 9 | T1E_0038 | 42599..43276 [+], 678 | 397692808 | hypothetical protein | |
| 10 | T1E_0039 (pgsA) | 43574..44044 [-], 471 | 397692809 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | |
| 11 | T1E_0040 (uvrC) | 44168..45925 [-], 1758 | 397692810 | UvrABC system protein C | |
| 12 | T1E_0041 (repB) | 45998..46621 [-], 624 | 397692811 | DNA-binding response regulator GacA | |
| 13 | T1E_0042 | 46700..47089 [-], 390 | 397692812 | helix-turn-helix domain-containing protein | |
| 14 | T1E_0043 | 47197..47640 [-], 444 | 397692813 | GCN5-related N-acetyltransferase | |
| 15 | T1E_0044 | 47651..48037 [-], 387 | 397692814 | hypothetical protein | |
| 16 | T1E_0045 (pitA) | 48167..49783 [+], 1617 | 397692815 | phosphate transporter | |
| 17 | T1E_0046 | 49799..50518 [-], 720 | 397692816 | hypothetical protein | TssL |
| 18 | T1E_0047 | 50583..51920 [-], 1338 | 397692817 | hypothetical protein | TssK |
| 19 | T1E_0048 | 51970..52767 [-], 798 | 397692818 | hypothetical protein | TssJ |
20 | T1E_0049 | 52764..52967 [-], 204 | 397692819 | FHA domain-containing protein | Fha |
| 21 | T1E_0050 | 52973..53896 [-], 924 | 397692820 | hypothetical protein | TssG |
| 22 | T1E_0051 | 53953..55719 [-], 1767 | 397692821 | hypothetical protein | TssF |
| 23 | T1E_0052 | 55723..56133 [-], 411 | 397692822 | hypothetical protein | TssE |
| 24 | T1E_0053 | 56130..57617 [-], 1488 | 397692823 | hypothetical protein | TssC |
| 25 | T1E_0054 | 57635..58138 [-], 504 | 397692824 | hypothetical protein | TssB |
| 26 | T1E_0055 | 58506..59045 [+], 540 | 397692825 | hypothetical protein | |
| 27 | T1E_0056 | 59033..60499 [+], 1467 | 397692826 | hypothetical protein | TssA |
| 28 | T1E_0057 | 60496..64122 [+], 3627 | 397692827 | hypothetical protein | TssM |
| 29 | T1E_0058 | 64133..64255 [+], 123 | 397692828 | hypothetical protein | |
| 30 | T1E_0059 | 64256..64771 [-], 516 | 397692829 | sigma-70, region 4 type 2 | |
| 31 | T1E_0060 | 65221..65520 [-], 300 | 397692830 | hypothetical protein | |
| 32 | T1E_0061 | 65651..66304 [+], 654 | 397692831 | prophage repressor | |
| 33 | T1E_0062 | 66361..67035 [+], 675 | 397692832 | prophage repressor | |
| 34 | T1E_0063 | 67119..67694 [-], 576 | 397692833 | hypothetical protein | |
| |
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein
SecReT6 ID
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein