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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | GEM_3031 | 3311401..3312429 [-], 1029 | 402567776 | Mg2 transporter protein CorA family protein | |
2 | GEM_3032 | 3312638..3313591 [-], 954 | 402567777 | tail fiber protein | |
3 | GEM_3033 | 3313713..3314558 [+], 846 | 402567778 | peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin | |
4 | GEM_3034 | 3314859..3318800 [+], 3942 | 402567779 | type VI secretion protein IcmF | TssM |
5 | GEM_3035 | 3318797..3319786 [+], 990 | 402567780 | hypothetical protein | |
6 | GEM_3036 | 3319791..3320747 [+], 957 | 402567781 | OmpA/MotB domain-containing protein | TagL |
7 | GEM_3037 | 3320825..3321946 [-], 1122 | 402567782 | type VI secretion-associated protein, ImpA family | TssA |
8 | GEM_3038 | 3321986..3324655 [-], 2670 | 402567783 | type VI secretion ATPase, ClpV1 family | TssH |
9 | GEM_3039 | 3324700..3325800 [-], 1101 | 402567784 | type VI secretion system protein | TssG |
10 | GEM_3040 | 3325764..3327599 [-], 1836 | 402567785 | type VI secretion system protein | TssF |
11 | GEM_3041 | 3327677..3328162 [-], 486 | 402567786 | type VI secretion system protein TssE | TssE |
12 | GEM_3042 | 3328225..3328728 [-], 504 | 402567787 | type VI secretion system protein | TssD |
13 | GEM_3043 | 3328799..3330289 [-], 1491 | 402567788 | type VI secretion protein | TssC |
14 | GEM_3044 | 3330305..3330820 [-], 516 | 402567789 | type VI secretion system protein | TssB |
15 | GEM_3045 | 3330865..3331503 [-], 639 | 402567790 | Tetratricopeptide TPR 2 repeat protein | |
16 | GEM_3046 | 3331894..3332493 [+], 600 | 402567791 | type VI secretion system protein | TssJ |
17 | GEM_3047 | 3332596..3333942 [+], 1347 | 402567792 | type VI secretion system protein | TssK |
18 | GEM_3048 | 3333939..3334721 [+], 783 | 402567793 | transmembrane protein | TssL |
19 | GEM_3049 | 3334808..3335125 [-], 318 | 402567794 | hypothetical protein | |
20 | GEM_3050 | 3335465..3336265 [+], 801 | 402567795 | extracellular solute-binding protein | |
21 | GEM_3051 | 3336347..3336550 [-], 204 | 402567796 | hypothetical protein | |
22 | GEM_3052 | 3336869..3337894 [+], 1026 | 402567797 | XRE family transcriptional regulator | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein