SecReT6

T6SS
Effector
Immunity
Reference

I. Summary

SecReT6 ID	7
Strain	Mesorhizobium loti MAFF303099
Replicon	chromosome [Browse all T6SS(s) in this replicon]
Accession	NC_002678
Location	1876685..1921952
Comment
Function	N/A
T6SS Type	Type i; subtype i3
Bioinformatics investigation has been performed on this T6SS.

II. T6SS components

Component	TssH	TssD	TssL	TssI	TssA	TssB	TssC	TssE	TssF
Number	1	1	2	1	1	1	1	1	1
Component	TssG	TssJ	TssK	TssM
Number	1	1	1	2


III. genome coordinates of the T6SS gene cluster
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Note
1	mll2323	1872981..1874147 [-], 1167	13472126	hypothetical protein
2	mll2325	1874204..1874971 [-], 768	13472127	transcriptional regulator
3	mlr2326	1875198..1876607 [+], 1410	13472128	sugar binding protein of sugar ABC transporter
4	mlr2327	1876685..1877644 [+], 960	13472129	sugar ABC transporter permease
5	mlr2328	1877641..1878531 [+], 891	13472130	sugar ABC transporter permease
6	mlr2329	1878542..1879639 [+], 1098	13472131	sugar ABC transporter ATP-binding protein
7	mlr2330	1879666..1880829 [+], 1164	13472132	hypothetical protein
8	mlr2332	1880853..1881602 [+], 750	13472133	hypothetical protein
9	mll2333	1881611..1882051 [-], 441	13472134	hypothetical protein
10	msr2334	1882032..1882193 [+], 162	13472135	hypothetical protein
11	mll2335	1882260..1885097 [-], 2838	13472136	ClpA/B-type protease	TssH
12	mlr2336	1885421..1886596 [+], 1176	13472137	hypothetical protein	TssA
13	mlr2337	1886602..1887138 [+], 537	13472138	hypothetical protein	TssB
14	mlr2338	1887142..1888647 [+], 1506	13472139	hypothetical protein	TssC
15	mlr2339	1888697..1889179 [+], 483	13472140	hypothetical protein	TssD
16	mlr2341	1889166..1889918 [+], 753	13472141	hypothetical protein	TssE
17	mlr2342	1889920..1891794 [+], 1875	13472142	hypothetical protein	TssF
18	mlr2343	1891758..1892825 [+], 1068	13472143	hypothetical protein	TssG
19	mlr2345	1892822..1894282 [+], 1461	13472144	hypothetical protein	Fha
20	mlr2346	1894286..1894738 [+], 453	13472145	hypothetical protein	TssJ
21	mlr2347	1894779..1896113 [+], 1335	13472146	hypothetical protein	TssK
22	mlr2348	1896118..1897446 [+], 1329	13472147	hypothetical protein	TssL
23	mlr2349	1897448..1900990 [+], 3543	13472148	hypothetical protein	TssM
24	mlr2350	1900972..1901514 [+], 543	13472149	hypothetical protein
25	mlr2351	1901514..1902617 [+], 1104	13472150	hypothetical protein
26	mlr2352	1902614..1903657 [+], 1044	13472151	3-oxoacyl-ACP synthase
27	mlr2353	1903654..1904703 [+], 1050	13472152	hypothetical protein
28	mlr2354	1904700..1905761 [+], 1062	13472153	hypothetical protein
29	mll2355	1905788..1906126 [-], 339	13472154	hypothetical protein
30	mll2356	1906126..1906548 [-], 423	13472155	hypothetical protein
31	mll2357	1906557..1908884 [-], 2328	13472156	hypothetical protein	TssI
32	mlr2358	1909132..1910211 [+], 1080	13472157	hypothetical protein	Fha
33	mlr2359	1910475..1911989 [+], 1515	13472158	hypothetical protein	TssL
34	mlr2360	1911989..1915519 [+], 3531	13472159	hypothetical protein	TssM
35	mlr2361	1915592..1916434 [+], 843	13472160	phosphoprotein phosphatase
36	mlr2363	1916431..1919004 [+], 2574	13472161	serine/threonine kinase
37	mlr2364	1919017..1919517 [+], 501	13472162	hypothetical protein
38	mlr2365	1919514..1921952 [+], 2439	13472163	hypothetical protein
39	mlr2366	1922263..1923591 [+], 1329	13472164	hypothetical protein
40	mll2368	1923670..1924173 [-], 504	13472165	hypothetical protein	TagL
41	mlr2370	1924376..1924921 [+], 546	13472166	hypothetical protein
42	mll2372	1924975..1926141 [-], 1167	13472167	hypothetical protein

Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

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Proteins Genes

V. Investigation of the genomic context of the T6SS gene cluster.

N/A